SHGC-133063 Marker Search Result - Rat Genome Database

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Marker: SHGC-133063

Symbol: SHGC-133063
Previously known as:
RGD ID: 1781954
Expected Size: 152 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371013,179,296 - 13,179,447UniSTSGRCh37
Build 361013,219,302 - 13,219,453RGDNCBI36
Celera1013,106,122 - 13,106,273RGD
Cytogenetic Map10p13UniSTS
HuRef1013,091,936 - 13,092,087UniSTS
TNG Radiation Hybrid Map1035579.0UniSTS
Is Marker For: Genes:   OPTN  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AAAGGAAGGAAGGAGAAGGAAGG
Reverse Primer TCGCATCAACCAAACATTAAAAA
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001008211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001008212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001008213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF070533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL355355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001618.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G48304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G48306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976367.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 10133 UniSTS
UniSTS SHGC-133063 UniSTS SSLP Pipeline