STS-N30552 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: STS-N30552

Symbol: STS-N30552
Previously known as:
RGD ID: 1774669
Expected Size: 137 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371953,569,934 - 53,570,069UniSTSGRCh37
Build 361958,261,746 - 58,261,881RGDNCBI36
Celera1950,617,472 - 50,617,607RGD
Cytogenetic Map19q13.42UniSTS
HuRef1949,894,723 - 49,894,858UniSTS
GeneMap99-GB4 RH Map19278.44UniSTS
NCBI RH Map19576.1UniSTS
Is Marker For: Genes:   ZNF160  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGCAAAATGTGCTTCAAG
Reverse Primer GAACAAAACTCCATCTAAAGAA
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001102603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB046831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK024442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001627.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583353.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976404.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 90338 UniSTS
UniSTS STS-N30552 UniSTS SSLP Pipeline