WI-21645 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: WI-21645

Symbol: WI-21645
Previously known as: HSA.24917; STS-F09012; 
RGD ID: 1773205
Expected Size: 266 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371195,567,289 - 95,567,554UniSTSGRCh37
Build 361195,206,937 - 95,207,202RGDNCBI36
Celera1192,865,677 - 92,865,942RGD
Cytogenetic Map11q22UniSTS
HuRef1191,633,088 - 91,633,353UniSTS
GeneMap99-GB4 RH Map11319.17UniSTS
Whitehead-RH Map11416.2UniSTS
NCBI RH Map11794.1UniSTS
Is Marker For: Genes:   MTMR2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGACCAAGGGGACAAGAAGC
Reverse Primer TGAGAAGTACTGTGCTCAAATTTT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001243571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB028996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001619.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  F09012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G27482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL296151.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976377.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 8898 UniSTS
UniSTS WI-21645 UniSTS SSLP Pipeline