STS-U07681 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: STS-U07681

Symbol: STS-U07681
Previously known as:
RGD ID: 1767799
Expected Size: 157 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371578,461,368 - 78,461,524UniSTSGRCh37
Build 361576,248,423 - 76,248,579RGDNCBI36
Celera1555,397,898 - 55,398,054RGD
Cytogenetic Map15q25.1-q25.2UniSTS
HuRef1555,218,933 - 55,219,089UniSTS
GeneMap99-GB4 RH Map15272.24UniSTS
NCBI RH Map15519.7UniSTS
Is Marker For: Genes:   IDH3A  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer ACATCAGTCACTCTAAATGGACACC
Reverse Primer ACAGACCTAGGGACATCCACC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_005530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB014531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC090260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK093531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK222973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL442090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC036227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001623.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL300758.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976389.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U07681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 3419 UniSTS
UniSTS STS-U07681 UniSTS SSLP Pipeline