SHGC-142050 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: SHGC-142050

Symbol: SHGC-142050
Previously known as:
RGD ID: 1755119
Expected Size: 296 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371248,289,566 - 48,289,862UniSTSGRCh37
Build 361246,575,833 - 46,576,129RGDNCBI36
Celera1247,087,115 - 47,087,411RGD
Cytogenetic Map12q13.11UniSTS
HuRef1245,321,426 - 45,321,722UniSTS
TNG Radiation Hybrid Map1221637.0UniSTS
Is Marker For: Genes:   VDR  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGTCCAGCTTTCTATGAAAAAGTCA
Reverse Primer TTTCATTGGTTCTTGTTGCACAG
 

Region



Additional Information

Database Acc Id Source(s)
NCBI Gene 7421 UniSTS
UniSTS SHGC-142050 UniSTS SSLP Pipeline