G66627 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: G66627

Symbol: G66627
Previously known as: Xq3565; 
RGD ID: 1748055
Expected Size: 975 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X138,619,644 - 138,620,619UniSTSGRCh37
Build 36X138,447,310 - 138,448,285RGDNCBI36
CeleraX138,987,083 - 138,988,058RGD
Cytogenetic MapXq27.1-q27.2UniSTS
HuRefX127,887,341 - 127,888,316UniSTS
Is Marker For: Genes:   F9  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AAAGGACTCAGAAAGATCAG
Reverse Primer GATGGAAGTTGGTGAATTTG
 

Region

Nucleotide Sequences
GenBank Nucleotide AF536327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL033403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G66627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL302460.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976430.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K02402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 2158 UniSTS
UniSTS G66627 UniSTS SSLP Pipeline