GDB:455259 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: GDB:455259

Symbol: GDB:455259
Previously known as:
RGD ID: 1744467
Expected Size: 153 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377127,254,988 - 127,255,140UniSTSGRCh37
Build 367127,042,224 - 127,042,376RGDNCBI36
Celera7122,058,717 - 122,058,869RGD
Cytogenetic Map7q32UniSTS
HuRef7121,615,893 - 121,616,045UniSTS
CRA_TCAGchr7v27126,638,434 - 126,638,586UniSTS
Is Marker For: Genes:   PAX4  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGCTGTGTGAGCAAGATCCTAGGA
Reverse Primer TTGCCAGGCAAAGAGGGCTGGAC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_006193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB008913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC000359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC073934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF043978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC074761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH236947.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001615.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ048675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ442656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G31758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL296648.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976337.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 5078 UniSTS
UniSTS GDB:455259 UniSTS SSLP Pipeline