GDB:384719 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: GDB:384719

Symbol: GDB:384719
Previously known as:
RGD ID: 1743979
Expected Size: 167 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371221,531,157 - 21,531,323UniSTSGRCh37
Build 361221,422,424 - 21,422,590RGDNCBI36
Celera1226,686,551 - 26,686,717RGD
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map12p12UniSTS
HuRef1221,305,260 - 21,305,426UniSTS
Is Marker For: Genes:   IAPP   SLCO1A2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer ACCTCTACTGCATTCCTCTTGC
Reverse Primer TTCCATGTTACCAGTCATCAGG
 

Region

Nucleotide Sequences
GenBank Nucleotide AC006559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001620.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297009.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976379.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M21785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M26650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M27503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X13859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X14903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X52819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X55634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 3375 UniSTS
  6579 UniSTS
UniSTS GDB:384719 UniSTS SSLP Pipeline