GDB:177101 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: GDB:177101

Symbol: GDB:177101
Previously known as:
RGD ID: 1740981
Expected Size: 135 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371572,638,528 - 72,638,663UniSTSGRCh37
Build 361570,425,582 - 70,425,717RGDNCBI36
Celera1549,524,668 - 49,524,803RGD
Cytogenetic Map15q24.1UniSTS
HuRef1549,468,755 - 49,468,890UniSTS
Is Marker For: Genes:   HEXA  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CCCCTGAGCAGAAGGCTCTGGTG
Reverse Primer TCCTGCTCTCAGGCCCCAACCCTC
 

Region

Nucleotide Sequences
GenBank Nucleotide AC009690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC236722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001623.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL302187.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976389.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S62070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 3073 UniSTS
UniSTS GDB:177101 UniSTS SSLP Pipeline