RH123115 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH123115

Symbol: RH123115
Previously known as: G-104174; SHGC-104174; 
RGD ID: 1718823
Expected Size: 319 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37673,786,794 - 73,787,112UniSTSGRCh37
Build 36673,843,515 - 73,843,833RGDNCBI36
Celera674,179,920 - 74,180,238RGD
Cytogenetic Map6q14UniSTS
HuRef670,985,233 - 70,985,551UniSTS
TNG Radiation Hybrid Map634096.0UniSTS
Is Marker For: Genes:   KCNQ5  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CGTGGCAAAAATATTACCCTGAG
Reverse Primer AATTGCATAGGTAAAGCGCAGAA
 

Region

Nucleotide Sequences
GenBank Nucleotide AJ272509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL360236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001614.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G58300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G63779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL305693.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976332.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 56479 UniSTS
UniSTS RH123115 UniSTS SSLP Pipeline