RH120638 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH120638

Symbol: RH120638
Previously known as: SHGC-100427; 
RGD ID: 1713293
Expected Size: 276 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37975,434,637 - 75,434,912UniSTSGRCh37
Build 36974,624,457 - 74,624,732RGDNCBI36
Celera946,007,493 - 46,007,768RGD
Cytogenetic Map9q21.12UniSTS
HuRef945,257,965 - 45,258,240UniSTS
TNG Radiation Hybrid Map924960.0UniSTS
Is Marker For: Genes:   TMC1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGTGGTCACTTTTACTTGATGGC
Reverse Primer CCAAATTTACGTTGGATTGGCTA
 

Region

Nucleotide Sequences
GenBank Nucleotide AL162416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001617.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G52672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G55334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL307500.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976363.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 117531 UniSTS
UniSTS RH120638 UniSTS SSLP Pipeline