G43583 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: G43583

Symbol: G43583
Previously known as: WIAF-2456-STS; WIAF-2458-STS; 
RGD ID: 1694760
Expected Size: 200 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371523,004,737 - 23,004,936UniSTSGRCh37
Build 361520,556,178 - 20,556,377RGDNCBI36
Celera151,374,876 - 1,375,075RGD
Cytogenetic Map15q11UniSTS
Cytogenetic Map15q11.2UniSTS
HuRef151,317,120 - 1,317,319UniSTS
Is Marker For: Genes:   CYFIP1   NIPA2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTCCTCAAGGGGGAGAAAAC
Reverse Primer GCAGCTCACCACTGGCTG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001008860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001008892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001008894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001184888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001184889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC011767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC016204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK127094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY763579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471258.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001623.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486413.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS991051.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G43583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G43585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000119.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297017.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583466.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976387.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 23191 UniSTS
  81614 UniSTS
UniSTS G43583 UniSTS SSLP Pipeline