RH92484 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH92484

Symbol: RH92484
Previously known as: stSG47172; 
RGD ID: 1687281
Expected Size: 142 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3739,428,249 - 9,428,390UniSTSGRCh37
Build 3639,403,249 - 9,403,390RGDNCBI36
Celera39,362,950 - 9,363,091RGD
Cytogenetic Map3p25.3UniSTS
HuRef39,365,004 - 9,365,145UniSTS
GeneMap99-GB4 RH Map344.69UniSTS
Is Marker For: Genes:   THUMPD3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCACACAATGAATAGGTGGCA
Reverse Primer TGTAGTGGGCAATAGTTTGCC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001114092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_015453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC018506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC087407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL302396.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976316.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 25917 UniSTS
UniSTS RH92484 UniSTS SSLP Pipeline