RH27221 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH27221

Symbol: RH27221
Previously known as: A004N14; 
RGD ID: 1686498
Expected Size: 165 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372165,430,079 - 165,430,242UniSTSGRCh37
GRCh378109,214,020 - 109,215,243UniSTSGRCh37
Build 362165,138,325 - 165,138,488RGDNCBI36
Celera8105,401,171 - 105,402,394UniSTS
Celera2159,039,951 - 159,040,114RGD
Cytogenetic Map2q22-q24UniSTS
Cytogenetic Map8q22-q23UniSTS
HuRef8104,535,400 - 104,536,623UniSTS
HuRef2157,312,521 - 157,312,684UniSTS
Is Marker For: Genes:   GRB14   EIF3E   EIF3EP3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTTGTTTCCAAAATGTAAGT
Reverse Primer AGAAGAAACTTAATCAGAATAGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC107075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL355697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV168164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV180471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001610.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001616.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976313.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976342.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U54562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U62962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U85947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U94175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 100462836 UniSTS
  2888 UniSTS
  3646 UniSTS
UniSTS RH27221 UniSTS SSLP Pipeline