RH65681 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH65681

Symbol: RH65681
Previously known as: stSG31473; 
RGD ID: 1684359
Expected Size: 154 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37138,247,667 - 38,247,825UniSTSGRCh37
GRCh371450,576,204 - 50,576,356UniSTSGRCh37
Build 36138,020,254 - 38,020,412RGDNCBI36
Celera136,525,498 - 36,525,656RGD
Celera1430,443,345 - 30,443,497UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map1p34.3UniSTS
HuRef136,365,816 - 36,365,974UniSTS
HuRef1430,701,668 - 30,701,820UniSTS
Is Marker For: Genes:   VCPKMT  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCATGTGAATACAGCATGGG
Reverse Primer CTGGATTCAGGGCCATTG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001040662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC104336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL109758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001609.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001622.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G38715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976295.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976384.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 100129497 UniSTS
  79609 UniSTS
UniSTS RH65681 UniSTS SSLP Pipeline