RH46224 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH46224

Symbol: RH46224
Previously known as: stSG22181; 
RGD ID: 1680938
Expected Size: 125 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37545,255,154 - 45,255,279UniSTSGRCh37
Build 36545,290,911 - 45,291,036RGDNCBI36
Celera545,148,910 - 45,149,035RGD
Cytogenetic Map5p12UniSTS
HuRef545,207,324 - 45,207,449UniSTS
Is Marker For: Genes:   HCN1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CATTGCTAGCTATGGCACCA
Reverse Primer TCACGCTGTCTAACCCAGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_021072.3 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC099514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001613.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G36689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL295696.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976327.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 348980 UniSTS
UniSTS RH46224 UniSTS SSLP Pipeline