RH78062 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH78062

Symbol: RH78062
Previously known as: stSG40280; 
RGD ID: 1678011
Expected Size: 139 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37925,677,082 - 25,677,220UniSTSGRCh37
Build 36925,667,082 - 25,667,220RGDNCBI36
Celera925,604,124 - 25,604,262RGD
Cytogenetic Map9p21.2UniSTS
HuRef925,629,427 - 25,629,565UniSTS
Is Marker For: Genes:   TUSC1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGCCAAGACAGGCATGAGTT
Reverse Primer CAGCTGTTCTTTCATATGTGGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001004125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL590322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY168647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC036931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001617.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL295266.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976343.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 286319 UniSTS
UniSTS RH78062 UniSTS SSLP Pipeline