D22S1014E Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: D22S1014E

Symbol: D22S1014E
Previously known as: stSG2891; GDB:441564; 
RGD ID: 1676154
Expected Size: 87 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372222,053,444 - 22,053,530UniSTSGRCh37
Build 362220,383,444 - 20,383,530RGDNCBI36
Celera225,870,975 - 5,871,061RGD
Cytogenetic Map22q11.2UniSTS
HuRef225,011,094 - 5,011,180UniSTS
Is Marker For: Genes:   YPEL1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AAGAGTGCGAGCTGGCTG
Reverse Primer GGTCTGGGTTTAGGAAGGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_013313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB098734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC018751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001630.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL293730.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583384.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976417.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 29799 UniSTS
UniSTS D22S1014E UniSTS SSLP Pipeline