D11S3989 Marker Search Result - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Marker: D11S3989

Symbol: D11S3989
Previously known as: WI-9345; UTR-05195; GDB:588582; 
RGD ID: 1672881
Expected Size: 113 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,813,835 - 102,813,947UniSTSGRCh37
Build 3611102,319,045 - 102,319,157RGDNCBI36
Celera1199,975,415 - 99,975,527RGD
Cytogenetic Map11q22.3UniSTS
HuRef1198,741,785 - 98,741,897UniSTS
GeneMap99-GB4 RH Map11353.65UniSTS
Whitehead-RH Map11469.0UniSTS
Whitehead-YAC Contig Map11 UniSTS
Is Marker For: Genes:   MMP13  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTTCTCTGCATTTAAAAAAATCCC
Reverse Primer CAATAGTTCTTCCCTTGATGGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_002427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AP000789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY741163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001619.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G05928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL298410.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH159139.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976378.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X75308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 4322 UniSTS
UniSTS D11S3989 UniSTS SSLP Pipeline