SHGC-2627 Marker Search Result - Rat Genome Database

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Marker: SHGC-2627

Symbol: SHGC-2627
Previously known as: GDB:214548; GDB:223986; 
RGD ID: 1669729
Expected Size: 199 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3777,283,771 - 7,283,969UniSTSGRCh37
Build 3677,250,296 - 7,250,494RGDNCBI36
Celera77,253,514 - 7,253,712RGD
Cytogenetic Map7p21.3UniSTS
HuRef77,132,271 - 7,132,469UniSTS
CRA_TCAGchr7v277,330,933 - 7,331,131UniSTS
GeneMap99-G3 RH Map7307.0UniSTS
Is Marker For: Genes:   C1GALT1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTGCTCAGTGTTGTTAATATAGCTC
Reverse Primer GTGGTTTTATTAATGCACTTCAGGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_020156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF155582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH236948.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001615.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G15223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G18339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583382.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976334.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 56913 UniSTS
UniSTS SHGC-2627 UniSTS SSLP Pipeline