SHGC-52145 Marker Search Result - Rat Genome Database

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Marker: SHGC-52145

Symbol: SHGC-52145
Previously known as:
RGD ID: 1669124
Expected Size: 246 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37763,355,019 - 63,355,264UniSTSGRCh37
GRCh372127,141,540 - 27,141,785UniSTSGRCh37
Build 36762,992,454 - 62,992,699RGDNCBI36
Celera757,073,861 - 57,074,106RGD
Celera2112,324,955 - 12,325,200UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map21q21.3UniSTS
HuRef759,735,848 - 59,736,093UniSTS
HuRef2112,544,600 - 12,544,845UniSTS
CRA_TCAGchr7v2762,692,613 - 62,692,858UniSTS
Is Marker For: Genes:   GABPA   GABPAP  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTGAGCCCCAGGACATTCT
Reverse Primer CAATGAACCTGCCTTCACAC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001197297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_002040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC092634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BA000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001615.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001629.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU627790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G34715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL298246.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976337.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976414.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U13044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 2551 UniSTS
  8327 UniSTS
UniSTS SHGC-52145 UniSTS SSLP Pipeline