SHGC-56016 Marker Search Result - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Marker: SHGC-56016

Symbol: SHGC-56016
Previously known as: WI-11448; EST159537; 
RGD ID: 1652250
Expected Size: 127 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37730,505,305 - 30,505,431UniSTSGRCh37
Build 36730,471,830 - 30,471,956RGDNCBI36
Celera730,494,626 - 30,494,752RGD
Cytogenetic Map7p15-p14UniSTS
HuRef730,387,580 - 30,387,706UniSTS
CRA_TCAGchr7v2730,555,075 - 30,555,201UniSTS
GeneMap99-GB4 RH Map7130.86UniSTS
Whitehead-RH Map798.2UniSTS
Is Marker For: Genes:   NOD1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AATAACACAGCTTTCCATAAATTGG
Reverse Primer ACGCTGGGTTGTAACTCTAAGA
 

Region

Nucleotide Sequences
GenBank Nucleotide AC005154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF149773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001615.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G23652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL313456.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976334.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T89416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 10392 UniSTS
UniSTS SHGC-56016 UniSTS SSLP Pipeline