D10Got229 Marker Search Result - Rat Genome Database

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Marker: D10Got229

Symbol: D10Got229
Previously known as: oxsts3053; OT10.07; D0Got159; 
RGD ID: 1632144
Expected Size: 233 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2101,550,172 - 1,550,398 (+)MAPPERmRatBN7.2
Rnor_6.0101,462,872 - 1,463,097NCBIRnor6.0
Rnor_5.010359,984 - 360,209UniSTSRnor5.0
RGSC_v3.4101,786,780 - 1,787,005UniSTSRGSC3.4
Celera10611,219 - 611,444UniSTS
Cytogenetic Map10q11UniSTS
Is Marker For: Genes:   Bfar   RGD1305537   Parn  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CAGGGCAGGTAGAGGTGTCA
Reverse Primer GTTAGCTGGACTGCAGCTTGTAA
 

Region

Nucleotide Sequences
GenBank Nucleotide AU028942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH616888.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 304709 UniSTS
  360464 UniSTS
  363528 UniSTS
UniSTS 111843 UniSTS