D1S1677 Marker Search Result - Rat Genome Database

Symbol:

D1S1677

Previously known as:

GGAA22G10; CHLC.GGAA22G10.P17416; GDB:365560; G00-365-560; GGAA-D1S1677; CHLC.GGAA22G10;

RGD ID:

1341913

Expected Size:

203 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	1	163,559,701 - 163,559,903	UniSTS	GRCh37
Build 36	1	161,826,325 - 161,826,527	RGD	NCBI36
Celera	1	136,663,745 - 136,663,947	RGD
Cytogenetic Map	1	q23.3	UniSTS
Cytogenetic Map	1	q23	UniSTS
HuRef	1	134,804,939 - 134,805,141	UniSTS
Marshfield Genetic Map	1	175.62	RGD
Marshfield Genetic Map	1	175.62	UniSTS
deCODE Assembly Map	1	161.5	UniSTS
Whitehead-YAC Contig Map	1		UniSTS

Is Marker For:

QTLs: BW345_H PRSTS430_H PRSTS289_H
Genes: RGS4

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


GenBank Nucleotide	AL513307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001609.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	G09926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976304.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message