D5S421 Marker Search Result - Rat Genome Database

Symbol:

D5S421

Previously known as:

AFM210vd6; 210VD6; GC378-D5S421; HS210VD6; GDB:188361;

RGD ID:

1341870

Expected Size:

170 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	112,854,216 - 112,854,385	UniSTS	GRCh37
Build 36	5	112,882,115 - 112,882,284	RGD	NCBI36
Celera	5	108,802,030 - 108,802,199	RGD
Cytogenetic Map	5	q22.2	UniSTS
HuRef	5	108,037,127 - 108,037,288	UniSTS
Marshfield Genetic Map	5	122.01	RGD
Marshfield Genetic Map	5	122.01	UniSTS
Genethon Genetic Map	5	121.4	UniSTS
deCODE Assembly Map	5	118.78	UniSTS
Whitehead-YAC Contig Map	5		UniSTS

Is Marker For:

Genes: YTHDC2

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	TGGAAATAGAATCCAGGCTT
Reverse Primer	TCTATCGTTAACTTTATTGATTCAG

Region

Nucleotide Sequences


GenBank Nucleotide	AC008602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC093208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001613.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL295102.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL582994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976329.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z16951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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