D7S2251 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: D7S2251

Symbol: D7S2251
Previously known as: A040YH1; sWSS1756; GDB:3754311; W2814; HSA040YH1; GDB:555732; SHGC-20417; AFMa040yh1; 
RGD ID: 1341720
Expected Size: 170 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37736,288,553 - 36,288,706UniSTSGRCh37
GRCh37736,288,554 - 36,288,713UniSTSGRCh37
Build 36736,255,078 - 36,255,231RGDNCBI36
Celera736,273,148 - 36,273,303RGD
Celera736,273,149 - 36,273,310UniSTS
Cytogenetic Map7p14.2UniSTS
HuRef736,169,454 - 36,169,615UniSTS
HuRef736,169,455 - 36,169,622UniSTS
CRA_TCAGchr7v2736,326,599 - 36,326,752UniSTS
CRA_TCAGchr7v2736,326,600 - 36,326,759UniSTS
Marshfield Genetic Map754.84RGD
Genethon Genetic Map755.7UniSTS
TNG Radiation Hybrid Map718279.0UniSTS
Whitehead-YAC Contig Map7 UniSTS
Is Marker For: Genes:   EEPD1  


Annotation


References - curated
# Reference Title Reference Citation
1. Comprehensive human genetic maps: individual and sex-specific variation in recombination. Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGAAAGTGGGCATTTTAG
Reverse Primer GAAAAAGGTAGTGAGAGC
 

Region

Nucleotide Sequences
GenBank Nucleotide AC007327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC008266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BL000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH236951.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001615.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G20025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297087.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976334.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z51549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 80820 UniSTS