D9S178 Marker Search Result - Rat Genome Database

Symbol:

D9S178

Previously known as:

AFM242xh6; stSG784; SHGC-397; GDB:188514; 242XH6; HS242XH6;

RGD ID:

1341607

Expected Size:

222 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	9	4,121,587 - 4,121,681	UniSTS	GRCh37
GRCh37	9	4,121,276 - 4,121,497	UniSTS	GRCh37
Build 36	9	4,111,276 - 4,111,497	RGD	NCBI36
Celera	9	4,039,136 - 4,039,357	RGD
Celera	9	4,039,447 - 4,039,541	UniSTS
Cytogenetic Map	9	p24.2	UniSTS
HuRef	9	4,076,921 - 4,077,019	UniSTS
HuRef	9	4,076,610 - 4,076,831	UniSTS
Marshfield Genetic Map	9	9.83	RGD
Genethon Genetic Map	9	8.8	UniSTS
TNG Radiation Hybrid Map	9	2059.0	UniSTS
deCODE Assembly Map	9	8.11	UniSTS
Stanford-G3 RH Map	9	116.0	UniSTS
GeneMap99-GB4 RH Map	9	24.55	UniSTS
Whitehead-RH Map	9	21.1	UniSTS
Whitehead-YAC Contig Map	9		UniSTS
NCBI RH Map	9	44.6	UniSTS
GeneMap99-G3 RH Map	9	116.0	UniSTS

Is Marker For:

Genes: GLIS3

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	AGTTATATACTGTCTGCAATGTGTC
Reverse Primer	AGTCCCATAAATAATGTTCTGTTGTC

Region

Nucleotide Sequences


GenBank Nucleotide	AL133283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001617.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL299240.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976343.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z17099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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