D16S514 Marker Search Result - Rat Genome Database

Symbol:

D16S514

Previously known as:

AFM330vd9; 330VD9; HS330VD9; GDB:200001; stSG1168; SHGC-2227;

RGD ID:

1339194

Expected Size:

121 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	16	62,338,076 - 62,338,196	UniSTS	GRCh37
GRCh37	16	62,338,056 - 62,338,203	UniSTS	GRCh37
Build 36	16	60,895,557 - 60,895,704	RGD	NCBI36
Celera	16	46,841,923 - 46,842,076	RGD
Celera	16	46,841,943 - 46,842,069	UniSTS
HuRef	16	48,207,159 - 48,207,306	UniSTS
HuRef	16	48,207,179 - 48,207,299	UniSTS
Marshfield Genetic Map	16	81.15	RGD
Marshfield Genetic Map	16	81.15	UniSTS
Genethon Genetic Map	16	80.0	UniSTS
TNG Radiation Hybrid Map	16	26463.0	UniSTS
Stanford-G3 RH Map	16	2258.0	UniSTS
GeneMap99-GB4 RH Map	16	381.58	UniSTS
Whitehead-RH Map	16	283.9	UniSTS
Whitehead-YAC Contig Map	16		UniSTS
NCBI RH Map	16	486.1	UniSTS
GeneMap99-G3 RH Map	16	2702.0	UniSTS

Is Marker For:

Genes: NOD2 CYLD ADGRG1

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


GenBank Nucleotide	AC009161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC090551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001624.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL302188.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976392.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z24419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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