D11S1979 Marker Search Result - Rat Genome Database

Symbol:

D11S1979

Previously known as:

GATA45H10; GATA-D11S1979; SHGC-17516; CHLC.GATA45H10.P15229; GDB:684948; G00-364-293; CHLC.31932; CHLC.GATA45H10; CHLC.GATA45H10.31932;

RGD ID:

1338704

Expected Size:

256 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	11	85,619,480 - 85,619,735	UniSTS	GRCh37
Build 36	11	85,297,128 - 85,297,383	RGD	NCBI36
Celera	11	82,928,766 - 82,929,017	RGD
Cytogenetic Map	11	q14.1-q14.2	UniSTS
HuRef	11	81,916,665 - 81,916,912	UniSTS
Marshfield Genetic Map	11	87.89	RGD
Marshfield Genetic Map	11	87.89	UniSTS
Stanford-G3 RH Map	11	3792.0	UniSTS
Whitehead-RH Map	11	395.3	UniSTS

Is Marker For:

Genes: CCDC83

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


GenBank Nucleotide	AP003128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001619.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	G08867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976377.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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