D19S421 Marker Search Result - Rat Genome Database

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General

Marker: D19S421

Symbol:

D19S421

Previously known as:

AFMa123xe5; A123XE5; stSG1210; SHGC-2313; GDB:200105; HSA123XE5;

RGD ID:

1337182

Expected Size:

145 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	19	38,871,266 - 38,871,408	UniSTS	GRCh37
GRCh37	19	38,871,203 - 38,871,390	UniSTS	GRCh37
GRCh37	19	38,871,266 - 38,871,339	UniSTS	GRCh37
Build 36	19	43,563,043 - 43,563,230	RGD	NCBI36
Celera	19	35,673,501 - 35,673,574	UniSTS
Celera	19	35,673,438 - 35,673,627	RGD
Celera	19	35,673,501 - 35,673,645	UniSTS
Cytogenetic Map	19	q13.2	UniSTS
HuRef	19	35,318,858 - 35,318,931	UniSTS
HuRef	19	35,318,795 - 35,318,984	UniSTS
HuRef	19	35,318,858 - 35,319,002	UniSTS
Marshfield Genetic Map	19	63.1	RGD
Genethon Genetic Map	19	62.0	UniSTS
TNG Radiation Hybrid Map	19	14500.0	UniSTS
deCODE Assembly Map	19	64.12	UniSTS
Stanford-G3 RH Map	19	1614.0	UniSTS
GeneMap99-GB4 RH Map	19	226.94	UniSTS
NCBI RH Map	19	384.2	UniSTS
GeneMap99-G3 RH Map	19	1625.0	UniSTS

Is Marker For:

Genes: PSMD8

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	GTACCCCCTCTTCCAGAAAG
Reverse Primer	TGAGATAATGAGATGCCAGC

Region

Nucleotide Sequences


GenBank Nucleotide	AC005789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001627.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL296664.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583405.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976404.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z24619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	5714	UniSTS
UniSTS	56277	UniSTS

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Marker: D19S421