D11S1998 Marker Search Result - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Marker: D11S1998

Symbol: D11S1998
Previously known as: GATA23E06; GATA-D11S1998; CHLC.GATA23E06.P9034; GDB:684486; G00-365-155; CHLC.GATA23E06; SHGC-17503; 
RGD ID: 1298235
Expected Size: 0 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711117,697,760 - 117,697,916UniSTSGRCh37
Build 3611117,202,970 - 117,203,126RGDNCBI36
Celera11114,855,607 - 114,855,759RGD
Cytogenetic Map11q13UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map11q24UniSTS
HuRef11113,631,596 - 113,631,748UniSTS
Marshfield Genetic Map11113.13RGD
Marshfield Genetic Map11113.13UniSTS
deCODE Assembly Map11119.99UniSTS
Whitehead-RH Map11523.0UniSTS
Whitehead-YAC Contig Map11 UniSTS
Is Marker For: QTLs:   RA19_H   GLUCO129_H   GLUCO130_H  
Genes:   UCP2   FXYD2   BMIQ4  


Annotation


References - curated
# Reference Title Reference Citation
1. Comprehensive human genetic maps: individual and sex-specific variation in recombination. Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGCCATCAACTAGCTTTCCC
Reverse Primer GGGAGGCACCAACAGATG
 

Region

Nucleotide Sequences
GenBank Nucleotide AF241235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF316896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001619.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G08860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G27228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976378.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 338026 UniSTS
  474240 UniSTS
  486 UniSTS
  7351 UniSTS
UniSTS D11S1998 UniSTS SSLP Pipeline