D20Arb2 Marker Search Result - Rat Genome Database

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Marker: D20Arb2

Symbol: D20Arb2
Also known as: R0270-D07; oxsts7797; 
RGD ID: 11206
Expected Size: 164 (bp)
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2202,666,495 - 2,666,654 (+)MAPPER
mRatBN7.2202,646,395 - 2,646,556 (+)MAPPER
Rnor_6.0203,151,815 - 3,151,975NCBIRnor6.0
Rnor_6.0203,171,911 - 3,172,069NCBIRnor6.0
Rnor_5.0205,270,077 - 5,270,235UniSTSRnor5.0
Rnor_5.0205,249,981 - 5,250,141UniSTSRnor5.0
RGSC_v3.4202,790,512 - 2,790,672UniSTSRGSC3.4
RGSC_v3.4202,811,408 - 2,811,567RGDRGSC3.4
RGSC_v3.4202,790,511 - 2,790,672RGDRGSC3.4
RGSC_v3.4202,811,409 - 2,811,567UniSTSRGSC3.4
RGSC_v3.1202,790,738 - 2,790,899RGD
Celera2076,870 - 77,030UniSTS
Celera2096,911 - 97,069UniSTS
SHRSP x BN Map200.0RGD
SHRSP x BN Map200.0UniSTS
FHH x ACI Map200.16RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   DA.F344-Aia1/1   F344.DA-(D20Arb2-D20Arb8)/Arb   DA.F344-(D20Arb2-D20Arb8)/Arb   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
QTLs:   Ciaa1   Aia1  
Genes:   Ciaa1  


Strains and Sequence



Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3501RT1-O1RT1 class Ib, locus O12031605353162939Rat
1595920RT1-S2RT1 class Ib, locus S22031520733165871Rat
1595735Rps2-ps1ribosomal protein S2, pseudogene 12031594763160204Rat
1598370RT1-N3RT1 class Ib, locus N32031667933170945Rat

QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724519Bp144Blood pressure QTL 1440.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2015192000Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124652101Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125653396Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20126305996Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20126305996Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20127357423Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20128375393Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20128375393Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20128375393Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20128375393Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20128375393Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20133300419Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20137550487Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20137550487Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20201865447018654Rat
2306850Pia40Pristane induced arthritis QTL 400.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2020187706567419Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20299970747999707Rat
61472Aia1Adjuvant induced arthritis QTL 1180.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2031518156896013Rat
61448Ciaa1CIA Autoantibody QTL 1300.001blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)2031518156896013Rat

Additional Information

Database Acc Id Source(s)
NCBI Gene 326474 UniSTS
  474368 UniSTS
UniSTS 227284 UniSTS