D20Arb2 Marker Search Result - Rat Genome Database

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Marker: D20Arb2

Symbol: D20Arb2
Previously known as: oxsts7797; R0270-D07; 
RGD ID: 11206
Expected Size: 164 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2202,666,495 - 2,666,654 (+)MAPPERmRatBN7.2
mRatBN7.2202,646,395 - 2,646,556 (+)MAPPERmRatBN7.2
Rnor_6.0203,151,815 - 3,151,975NCBIRnor6.0
Rnor_6.0203,171,911 - 3,172,069NCBIRnor6.0
Rnor_5.0205,270,077 - 5,270,235UniSTSRnor5.0
Rnor_5.0205,249,981 - 5,250,141UniSTSRnor5.0
RGSC_v3.4202,790,512 - 2,790,672UniSTSRGSC3.4
RGSC_v3.4202,811,408 - 2,811,567RGDRGSC3.4
RGSC_v3.4202,790,511 - 2,790,672RGDRGSC3.4
RGSC_v3.4202,811,409 - 2,811,567UniSTSRGSC3.4
RGSC_v3.1202,790,738 - 2,790,899RGD
Celera2076,870 - 77,030UniSTS
Celera2096,911 - 97,069UniSTS
SHRSP x BN Map200.0RGD
SHRSP x BN Map200.0UniSTS
FHH x ACI Map200.16RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   DA.F344-Aia1/1   F344.DA-(D20Arb2-D20Arb8)/Arb   DA.F344-(D20Arb2-D20Arb8)/Arb   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
QTLs:   Ciaa1   Aia1  
Genes:   Ciaa1  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Genetic dissection of a rat model for rheumatoid arthritis: significant gender influences on autosomal modifier loci Furuya T, etal., Hum Mol Genet 2000 Sep 22;9(15):2241-50
3. Identification of four new quantitative trait loci regulating arthritis severity and one new quantitative trait locus regulating autoantibody production in rats with collagen-induced arthritis. Griffiths MM, etal., Arthritis Rheum 2000 Jun;43(6):1278-89
4. A genetic linkage map of rat chromosome 20 derived from five F2 crosses. Kawahito Y, etal., Immunogenetics 1998 Oct;48(5):335-8
5. Localization of quantitative trait loci regulating adjuvant-induced arthritis in rats: evidence for genetic factors common to multiple autoimmune diseases. Kawahito Y, etal., J Immunol 1998 Oct 15;161(8):4411-9
6. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
7. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
8. A genome scan localizes five non-MHC loci controlling collagen-induced arthritis in rats. Remmers EF, etal., Nat Genet 1996 Sep;14(1):82-5
9. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CAGGAGGATTAAGAGAGGTGCC
Reverse Primer CTGGCTTCAGAGATTCAACTGC
 

Region



Additional Information

Database Acc Id Source(s)
NCBI Gene 326474 UniSTS
  474368 UniSTS