Pigm (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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mRatBN7.2 | 13 | 84,838,329 - 84,842,026 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 84,838,175 - 84,843,381 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 87,341,646 - 87,345,343 (+) | NCBI | Rnor_SHR | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 88,741,920 - 88,745,617 (+) | NCBI | Rnor_SHRSP | | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 85,926,307 - 85,930,006 (+) | NCBI | Rnor_WKY | | | | Rnor_6.0 | 13 | 90,759,260 - 90,762,957 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 90,759,260 - 90,762,957 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 95,281,187 - 95,284,884 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 88,377,212 - 88,380,909 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 88,566,095 - 88,569,793 (+) | NCBI | | | | | Celera | 13 | 84,448,384 - 84,452,081 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | q24 | NCBI | | | | |
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PIGM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 160,024,953 - 160,031,990 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p13 Ensembl | 1 | 160,024,953 - 160,031,990 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 159,994,743 - 160,001,780 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 158,264,086 - 158,268,407 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 156,812,769 - 156,814,821 | NCBI | | | | | Celera | 1 | 133,065,903 - 133,070,225 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q23.2 | NCBI | | | | | HuRef | 1 | 131,354,186 - 131,358,509 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 161,392,783 - 161,397,106 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 159,162,027 - 159,169,067 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Pigm (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 172,204,098 - 172,211,666 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 172,204,113 - 172,211,666 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 172,376,531 - 172,384,099 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 172,376,546 - 172,384,099 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 174,306,662 - 174,314,230 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 174,213,231 - 174,217,208 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 175,229,959 - 175,237,523 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | H3 | NCBI | | | | | cM Map | 1 | 79.73 | NCBI | | | | |
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Pigm (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955468 | 11,818,604 - 11,819,872 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955468 | 11,817,647 - 11,820,456 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PIGM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1 | 1 | 89,560,492 - 89,567,215 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 135,378,843 - 135,387,789 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 139,303,208 - 139,307,797 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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PIGM (Canis lupus familiaris - dog) |
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Pigm (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 6,156,494 - 6,158,603 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936740 | 596,072 - 597,343 (+) | Ensembl | SpeTri2.0 | | | | SpeTri2.0 | NW_004936740 | 595,932 - 597,964 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PIGM (Sus scrofa - pig) |
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PIGM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 3,913,163 - 3,914,853 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 3,913,336 - 3,914,607 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 2,969,696 - 2,972,124 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pigm (Heterocephalus glaber - naked mole-rat) |
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