Gene: Ascl1 (achaete-scute family bHLH transcription factor 1) Rattus norvegicus
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Symbol: Ascl1
Name: achaete-scute family bHLH transcription factor 1
Description: ENCODES a protein that exhibits double-stranded DNA binding; protein homodimerization activity; bHLH transcription factor binding (ortholog); INVOLVED IN cellular response to magnetism; forebrain neuron differentiation; negative regulation of neuron differentiation; ASSOCIATED WITH abnormal parasympathetic system morphology; ASSOCIATED WITH Hyperplasia; Status Epilepticus; Stroke; FOUND IN neuronal cell body (ortholog); nucleus (ortholog); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,6-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: achaete-scute complex (Drosophila) homolog-like 1; achaete-scute complex homolog 1; achaete-scute complex homolog 1 (Drosophila); achaete-scute complex homolog-like 1; achaete-scute complex homolog-like 1 (Drosophila); achaete-scute homolog 1; Mash1
Orthologs:
Homo sapiens (human) : ASCL1 (achaete-scute family bHLH transcription factor 1)  HGNC  AGR
Mus musculus (house mouse) : Ascl1 (achaete-scute family bHLH transcription factor 1)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Ascl1 (achaete-scute family bHLH transcription factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ASCL1 (achaete-scute family bHLH transcription factor 1)
Canis lupus familiaris (dog) : ASCL1 (achaete-scute family bHLH transcription factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ascl1 (achaete-scute family bHLH transcription factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0728,038,662 - 28,040,504 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0728,152,425 - 28,154,275 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4724,145,578 - 24,168,494 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1724,165,848 - 24,167,679 (-)NCBI
Celera719,079,344 - 19,081,186 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ascl1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 71010
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2017-10-31
Status: ACTIVE