Pitx1 (paired-like homeodomain 1) - Rat Genome Database

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Gene: Pitx1 (paired-like homeodomain 1) Rattus norvegicus
Analyze
Symbol: Pitx1
Name: paired-like homeodomain 1
RGD ID: 69253
Description: Enables DNA-binding transcription factor activity. Involved in regulation of DNA-templated transcription. Predicted to be located in cytoplasm. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in clubfoot. Orthologous to human PITX1 (paired like homeodomain 1); INTERACTS WITH 7,12-dimethyltetraphene; all-trans-retinoic acid; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Bft; homeobox protein PITX1; paired-like homeodomain transcription factor 1; pituitary homeobox 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8178,794,051 - 8,805,477 (+)NCBIGRCr8
mRatBN7.2178,794,134 - 8,800,292 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,794,134 - 8,800,291 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx178,809,236 - 8,815,392 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01710,341,815 - 10,347,973 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0178,805,619 - 8,811,775 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,873,184 - 8,884,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,878,270 - 8,884,423 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,038,827 - 11,050,071 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41714,834,144 - 14,840,303 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11714,834,143 - 14,840,302 (+)NCBI
Celera178,876,388 - 8,882,546 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Characterization of 5'-flanking region of rat somatostatin receptor sst2 gene: transcriptional regulatory elements and activation by Pitx1 and estrogen. Kimura N, etal., Endocrinology 2001 Apr;142(4):1427-41.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Pitx factors are involved in basal and hormone-regulated activity of the human prolactin promoter. Quentien MH, etal., J Biol Chem 2002 Nov 15;277(46):44408-16.
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
11. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
12. Pituitary homeobox 1 activates the rat FSHbeta (rFSHbeta) gene through both direct and indirect interactions with the rFSHbeta gene promoter. Zakaria MM, etal., Mol Endocrinol 2002 Aug;16(8):1840-52.
Additional References at PubMed
PMID:8675014   PMID:9192866   PMID:9207461   PMID:10049363   PMID:10101115   PMID:10431247   PMID:15489334   PMID:15621531   PMID:16087728   PMID:16989801   PMID:17384148   PMID:17984056  
PMID:18231602   PMID:19531352   PMID:21300782   PMID:22071103   PMID:25258388   PMID:26306672   PMID:26612202   PMID:31527569  


Genomics

Comparative Map Data
Pitx1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8178,794,051 - 8,805,477 (+)NCBIGRCr8
mRatBN7.2178,794,134 - 8,800,292 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,794,134 - 8,800,291 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx178,809,236 - 8,815,392 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01710,341,815 - 10,347,973 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0178,805,619 - 8,811,775 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,873,184 - 8,884,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,878,270 - 8,884,423 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,038,827 - 11,050,071 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41714,834,144 - 14,840,303 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11714,834,143 - 14,840,302 (+)NCBI
Celera178,876,388 - 8,882,546 (+)NCBICelera
Cytogenetic Map17p14NCBI
PITX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385135,027,734 - 135,034,789 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5135,027,734 - 135,034,813 (-)EnsemblGRCh38hg38GRCh38
GRCh375134,363,424 - 134,369,918 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365134,391,323 - 134,397,863 (-)NCBINCBI36Build 36hg18NCBI36
Build 345134,391,367 - 134,397,887NCBI
Celera5130,487,209 - 130,493,751 (-)NCBICelera
Cytogenetic Map5q31.1NCBI
HuRef5129,551,412 - 129,557,483 (-)NCBIHuRef
CHM1_15133,796,087 - 133,802,610 (-)NCBICHM1_1
T2T-CHM13v2.05135,554,747 - 135,561,804 (-)NCBIT2T-CHM13v2.0
Pitx1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,972,857 - 55,984,002 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1355,972,864 - 55,984,005 (-)EnsemblGRCm39 Ensembl
GRCm381355,825,044 - 55,836,190 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,825,051 - 55,836,192 (-)EnsemblGRCm38mm10GRCm38
MGSCv371355,926,415 - 55,932,786 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361355,834,676 - 55,841,047 (-)NCBIMGSCv36mm8
Celera1356,876,993 - 56,883,263 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1330.06NCBI
Pitx1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540830,197,061 - 30,203,054 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540830,197,374 - 30,202,887 (-)NCBIChiLan1.0ChiLan1.0
PITX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24130,319,178 - 130,324,814 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15128,458,793 - 128,464,033 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05130,422,920 - 130,429,828 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15136,565,285 - 136,570,346 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5136,565,285 - 136,570,350 (-)Ensemblpanpan1.1panPan2
PITX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11123,069,731 - 23,075,085 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1123,069,716 - 23,080,941 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1121,819,266 - 21,824,629 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01123,876,327 - 23,881,033 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1123,875,377 - 23,887,094 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11122,575,479 - 22,580,842 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01122,441,426 - 22,446,796 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01123,084,230 - 23,089,593 (-)NCBIUU_Cfam_GSD_1.0
Pitx1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213123,186,180 - 123,192,158 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365972,211,080 - 2,217,071 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365972,211,087 - 2,217,065 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PITX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2137,200,423 - 137,206,979 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12137,200,424 - 137,212,500 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PITX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12337,807,486 - 37,820,540 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2337,807,378 - 37,813,948 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603440,096,580 - 40,108,540 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pitx1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473312,029,298 - 12,034,413 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473312,028,497 - 12,034,612 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pitx1
13 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:307
Count of miRNA genes:175
Interacting mature miRNAs:200
Transcripts:ENSRNOT00000015307
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
1581553Pur14Proteinuria QTL 145.30.0001urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17797996816317111Rat

Markers in Region
U71206  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2178,799,526 - 8,799,635 (+)MAPPERmRatBN7.2
Rnor_6.0178,883,663 - 8,883,771NCBIRnor6.0
Rnor_5.01711,049,306 - 11,049,414UniSTSRnor5.0
RGSC_v3.41714,839,538 - 14,839,646UniSTSRGSC3.4
Celera178,881,781 - 8,881,889UniSTS
Cytogenetic Map17p14UniSTS
Pitx1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2178,798,856 - 8,799,007 (+)MAPPERmRatBN7.2
Rnor_6.0178,882,993 - 8,883,143NCBIRnor6.0
Rnor_5.01711,048,636 - 11,048,786UniSTSRnor5.0
RGSC_v3.41714,838,868 - 14,839,018UniSTSRGSC3.4
Celera178,881,111 - 8,881,261UniSTS
Cytogenetic Map17p14UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1
Low 3 6 4 4 4 1 3 15 11 9 1
Below cutoff 10 5 5 1 5 7 8 14 4 11 1 7

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000015307   ⟹   ENSRNOP00000015307
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl178,794,134 - 8,800,291 (+)Ensembl
Rnor_6.0 Ensembl178,878,270 - 8,884,423 (+)Ensembl
RefSeq Acc Id: NM_053624   ⟹   NP_446076
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8178,799,319 - 8,805,477 (+)NCBI
mRatBN7.2178,794,134 - 8,800,292 (+)NCBI
Rnor_6.0178,878,270 - 8,884,428 (+)NCBI
Rnor_5.01711,038,827 - 11,050,071 (+)NCBI
RGSC_v3.41714,834,144 - 14,840,303 (+)RGD
Celera178,876,388 - 8,882,546 (+)RGD
Sequence:
RefSeq Acc Id: XM_063276015   ⟹   XP_063132085
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8178,794,057 - 8,805,477 (+)NCBI
RefSeq Acc Id: XM_063276016   ⟹   XP_063132086
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8178,794,051 - 8,805,477 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_446076   ⟸   NM_053624
- UniProtKB: Q99NA7 (UniProtKB/Swiss-Prot),   A6KAP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000015307   ⟸   ENSRNOT00000015307
RefSeq Acc Id: XP_063132086   ⟸   XM_063276016
- Peptide Label: isoform X1
- UniProtKB: Q99NA7 (UniProtKB/Swiss-Prot),   A6KAP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132085   ⟸   XM_063276015
- Peptide Label: isoform X1
- UniProtKB: Q99NA7 (UniProtKB/Swiss-Prot),   A6KAP5 (UniProtKB/TrEMBL)
Protein Domains
Homeobox   OAR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99NA7-F1-model_v2 AlphaFold Q99NA7 1-315 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700290
Promoter ID:EPDNEW_R10813
Type:single initiation site
Name:Pitx1_1
Description:paired-like homeodomain 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0178,878,261 - 8,878,321EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:69253 AgrOrtholog
BioCyc Gene G2FUF-10225 BioCyc
Ensembl Genes ENSRNOG00000011423 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055013772 UniProtKB/Swiss-Prot
  ENSRNOG00055023107 UniProtKB/Swiss-Prot
  ENSRNOG00060019729 UniProtKB/Swiss-Prot
  ENSRNOG00065021959 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000015307 ENTREZGENE
  ENSRNOT00000015307.7 UniProtKB/Swiss-Prot
  ENSRNOT00055023676 UniProtKB/Swiss-Prot
  ENSRNOT00055039683 UniProtKB/Swiss-Prot
  ENSRNOT00060034058 UniProtKB/Swiss-Prot
  ENSRNOT00065037387 UniProtKB/Swiss-Prot
Gene3D-CATH Homeodomain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:5621094 IMAGE-MGC_LOAD
InterPro Homeobox-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_Pitx/unc30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OAR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:113983 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:72352 IMAGE-MGC_LOAD
NCBI Gene 113983 ENTREZGENE
PANTHER PITUITARY HOMEOBOX 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PITUITARY HOMEOBOX HOMOLOG PTX1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Homeodomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pitx1 PhenoGen
PIRSF Homeobox_protein_Pitx/Unc30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HOMEOBOX_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HOMEOBOX_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011423 RatGTEx
  ENSRNOG00055013772 RatGTEx
  ENSRNOG00055023107 RatGTEx
  ENSRNOG00060019729 RatGTEx
  ENSRNOG00065021959 RatGTEx
SMART HOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Homeodomain-like UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
TIGR TC223333
UniProt A6KAP5 ENTREZGENE, UniProtKB/TrEMBL
  PITX1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-09 Pitx1  paired-like homeodomain 1  Pitx1  paired-like homeodomain transcription factor 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Pitx1  paired-like homeodomain transcription factor 1      Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_product belongs to family of bicoid homeodomain proteins 633538