Rpl32 (ribosomal protein L32) - Rat Genome Database

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Gene: Rpl32 (ribosomal protein L32) Rattus norvegicus

Analyze

Symbol:

Rpl32

Name:

ribosomal protein L32

RGD ID:

621203

Description:

Predicted to be a structural constituent of ribosome. Involved in cellular response to dexamethasone stimulus and liver regeneration. Part of cytosolic large ribosomal subunit. Orthologous to human RPL32 (ribosomal protein L32); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

60S ribosomal protein L32; MGC72905

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RPL32 (ribosomal protein L32)	RGD	RGD
Mus musculus (house mouse):	Rpl32 (ribosomal protein L32)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Rpl32 (ribosomal protein L32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RPL32 (ribosomal protein L32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rpl32 (ribosomal protein L32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RPL32 (ribosomal protein L32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RPL32 (ribosomal protein L32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rpl32 (ribosomal protein L32)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RPL32 (ribosomal protein L32)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rpl32 (ribosomal protein L32)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rpl32 (ribosomal protein L32)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rpl-32	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	RPL32	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	RpL32	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rpl32	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	XB972976 [provisional:rpl32]	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB)

Related Pseudogenes:

Rpl32-ps3

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	148,864,048 - 148,867,612 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	148,864,044 - 148,867,612 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	155,092,786 - 155,096,354 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	4	150,876,803 - 150,880,371 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	4	149,499,705 - 149,503,273 (-)	NCBI	Rnor_WKY
Rnor_6.0	4	147,715,480 - 147,719,044 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	145,777,318 - 145,777,767 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	4	147,715,473 - 147,719,072 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	210,999,039 - 211,002,603 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	151,941,599 - 151,945,012 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	145,189,431 - 145,189,896 (-)	NCBI
Celera	4	137,754,089 - 137,757,653 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-pilocarpine (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (EXP)

6-propyl-2-thiouracil (EXP)

amino acid (ISO)

amiodarone (EXP)

ammonium chloride (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

azoxystrobin (ISO)

benzbromarone (EXP)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (EXP,ISO)

cadmium atom (ISO)

chloropicrin (ISO)

clofibrate (EXP,ISO)

clofibric acid (EXP)

cocaine (EXP)

copper(II) chloride (ISO)

dexamethasone (ISO)

dibutyl phthalate (EXP)

disodium selenite (ISO)

enzyme inhibitor (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenpyroximate (ISO)

fipronil (EXP)

folic acid (ISO)

gallic acid (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

inulin (ISO)

ivermectin (ISO)

L-ethionine (EXP)

methylisothiazolinone (ISO)

N-nitrosodiethylamine (EXP,ISO)

omeprazole (EXP)

paracetamol (ISO)

parathion (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (EXP)

propiconazole (ISO)

pyrimidifen (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rotenone (ISO)

sirolimus (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thapsigargin (EXP)

thioacetamide (EXP)

torin 1 (ISO)

trichloroethene (EXP)

tungsten (ISO)

urethane (ISO)

ursodeoxycholic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to dexamethasone stimulus (IEP)

cytoplasmic translation (ISO)

liver regeneration (IEP)

Cellular Component

cytoplasmic side of rough endoplasmic reticulum membrane (ISO)

cytosolic large ribosomal subunit (IBA,IDA,ISO)

cytosolic ribosome (ISO)

large ribosomal subunit (ISO)

polysomal ribosome (ISO)

synapse (ISO)

Molecular Function

structural constituent of ribosome (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

ribosome biogenesis pathway (ISO)

translation pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Structures of the human and Drosophila 80S ribosome.	Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2.	Coordinate regulation of ribosomal protein mRNA level in regenerating rat liver. Study with the corresponding mouse cloned cDNAs.	Faliks D and Meyuhas O, Nucleic Acids Res. 1982 Feb 11;10(3):789-801.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	The primary structure of rat ribosomal protein L32.	Rajchel A, etal., Nucleic Acids Res 1988 Mar 25;16(5):2347.
7.	GOA pipeline	RGD automated data pipeline
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Comprehensive gene review and curation	RGD comprehensive gene curation
11.	Dexamethasone stimulates ribosomal protein L32 gene transcription in rat myoblasts.	Sienna N, etal., Mol Cell Endocrinol. 2000 Sep 25;167(1-2):127-37.
12.	Isolation of eukaryotic ribosomal proteins. Purification and characterization of 60 S ribosomal subunit proteins L3, L6, L7', L8, L10, L15, L17, L18, L19, L23', L25, L27', L28, L29, L31, L32, L34, L35, L36, L36', and L37'.	Tsurugi K, etal., J Biol Chem. 1977 Jun 10;252(11):3961-9.

Additional References at PubMed

PMID:6993285	PMID:12477932	PMID:12962325	PMID:15489334	PMID:16854843	PMID:19946888	PMID:22658674	PMID:24930395	PMID:25957688

Genomics

Comparative Map Data

Rpl32
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	148,864,048 - 148,867,612 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	148,864,044 - 148,867,612 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	155,092,786 - 155,096,354 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	4	150,876,803 - 150,880,371 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	4	149,499,705 - 149,503,273 (-)	NCBI	Rnor_WKY
Rnor_6.0	4	147,715,480 - 147,719,044 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	145,777,318 - 145,777,767 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	4	147,715,473 - 147,719,072 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	210,999,039 - 211,002,603 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	151,941,599 - 151,945,012 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	145,189,431 - 145,189,896 (-)	NCBI
Celera	4	137,754,089 - 137,757,653 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

RPL32
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	12,834,485 - 12,841,582 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	3	12,834,485 - 12,841,582 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	12,875,984 - 12,883,081 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	12,851,444 - 12,858,081 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	12,851,444 - 12,856,949	NCBI
Celera	3	12,814,735 - 12,821,372 (-)	NCBI		Celera
Cytogenetic Map	3	p25.2	NCBI
HuRef	3	12,810,357 - 12,816,994 (-)	NCBI		HuRef
CHM1_1	3	12,826,437 - 12,833,074 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	12,835,994 - 12,843,091 (-)	NCBI		T2T-CHM13v2.0

Rpl32
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	115,782,475 - 115,785,704 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	115,782,466 - 115,785,708 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	115,805,514 - 115,808,743 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	115,805,505 - 115,808,747 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	115,755,532 - 115,758,761 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	115,771,133 - 115,774,362 (-)	NCBI		MGSCv36	mm8
Celera	6	117,645,158 - 117,648,387 (-)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	53.72	NCBI

Rpl32
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	17,885,314 - 17,890,536 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	17,886,048 - 17,890,536 (+)	NCBI	ChiLan1.0	ChiLan1.0

RPL32
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	3	12,823,281 - 12,829,041 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	12,759,205 - 12,764,800 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	13,103,471 - 13,109,043 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	13,103,471 - 13,109,044 (-)	Ensembl	panpan1.1		panPan2

Rpl32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	17,923,205 - 17,927,086 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	982,092 - 986,567 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936602	982,633 - 986,458 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPL32
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	68,786,856 - 68,793,204 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	68,788,109 - 68,793,265 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	76,057,726 - 76,061,577 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RPL32
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	48,811,342 - 48,816,905 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	48,811,401 - 48,816,882 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	117,672,080 - 117,677,680 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rpl32
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624872	430,302 - 435,365 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624872	430,677 - 435,145 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rpl32
20 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	97
Count of miRNA genes:	88
Interacting mature miRNAs:	93
Transcripts:	ENSRNOT00000014493, ENSRNOT00000046799
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	11320076	180699135	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	44463720	155883716	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	56647873	149491524	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	59948935	154902892	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	64528739	157573521	Rat
70177	Xhs1	X-ray hypersensitivity QTL 1	25.1		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	4	82798864	152731274	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	83428419	177635233	Rat
12798523	Anxrr56	Anxiety related response QTL 56	2.83	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	85253748	150276390	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	85379421	167139601	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	93308457	167139447	Rat
2302049	Pia32	Pristane induced arthritis QTL 32	5.1	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)	4	105789505	150789505	Rat
731165	Uae21	Urinary albumin excretion QTL 21	2.4	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	4	106649412	151649412	Rat
61406	Scwia1	Streptococcal cell wall induced arthritis QTL 1	2.3		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	4	106805662	151805662	Rat
7207480	Bss105	Bone structure and strength QTL 105	8.1		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	4	109827074	154827074	Rat
1549832	Bss3	Bone structure and strength QTL 3	11		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	4	109827074	154827074	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	109866907	167139601	Rat
1331759	Hrtrt13	Heart rate QTL 13	3.54628		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	110275411	168266883	Rat
6478760	Anxrr45	Anxiety related response QTL 45		0.06717	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	110870972	155870972	Rat
6478763	Anxrr46	Anxiety related response QTL 46		0.07428	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	110870972	155870972	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	114627026	159627026	Rat
1300116	Hrtrt5	Heart rate QTL 5	3.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	116179486	151161268	Rat
724535	Cm18	Cardiac mass QTL 18	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	4	118856416	163856416	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	119428175	157578333	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	123143783	168143783	Rat
631683	Bp116	Blood pressure QTL 116		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	124303370	169303370	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	124778595	169778595	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	125590636	170590636	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	126395976	167139601	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
1549827	Scl46	Serum cholesterol level QTL 46	3.5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	4	132396220	177396220	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	132422778	177422778	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	132642577	167139601	Rat
2303623	Vencon2	Ventilatory control QTL 2	3.8		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	4	135204660	180204660	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	135699135	180699135	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	137755016	181392681	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	138503169	179293946	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	144639524	182687754	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	144639524	182687754	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	145568712	182687754	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	146565735	175236377	Rat
12798525	Anxrr57	Anxiety related response QTL 57	3.21	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	147278504	167139601	Rat
1582237	Kidm34	Kidney mass QTL 34	4	0.0001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	4	148090542	168069246	Rat
61446	Coreg2	Compensatory renal growth QTL 2	3.5		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	4	148423102	157580971	Rat

Markers in Region

RH135298

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	148,863,670 - 148,863,867 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	147,715,103 - 147,715,299	NCBI	Rnor6.0
Rnor_5.0	4	210,998,662 - 210,998,858	UniSTS	Rnor5.0
Celera	4	137,753,712 - 137,753,908	UniSTS
RH 3.4 Map	4	951.41	UniSTS
Cytogenetic Map	4	q42	UniSTS

AI012088

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	148,868,008 - 148,868,313 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	147,719,441 - 147,719,745	NCBI	Rnor6.0
Rnor_5.0	4	211,003,000 - 211,003,304	UniSTS	Rnor5.0
RGSC_v3.4	4	151,945,409 - 151,945,713	UniSTS	RGSC3.4
Celera	4	137,758,050 - 137,758,354	UniSTS
RH 3.4 Map	4	966.9	UniSTS
Cytogenetic Map	4	q42	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High	2		6	6	3	6			10	14	25
Medium	3	43	51	35	19	35	8	11	64	22	17	12	8
Low	1	11	2	2		2	4	7	23	2	14	2	4
Below cutoff		20	6	3	4	3	3	3	28	12	12	5	3

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_013226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC061562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC082797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ209939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ210972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ216977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ216988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ219795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X06483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000014493 ⟹ ENSRNOP00000014493

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	148,864,044 - 148,867,612 (-)	Ensembl
Rnor_6.0 Ensembl	4	147,715,473 - 147,719,072 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000046799 ⟹ ENSRNOP00000041638

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	112,494,810 - 112,495,467 (+)	Ensembl
Rnor_6.0 Ensembl	6	145,777,318 - 145,777,767 (-)	Ensembl

RefSeq Acc Id:

NM_013226 ⟹ NP_037358

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	4	148,864,048 - 148,867,612 (-)	NCBI
Rnor_6.0	4	147,715,480 - 147,719,044 (-)	NCBI
Rnor_5.0	4	210,999,039 - 211,002,603 (-)	NCBI
RGSC_v3.4	4	151,941,599 - 151,945,012 (-)	RGD
Celera	4	137,754,089 - 137,757,653 (-)	RGD

Sequence:

show sequence

GGGGCTTCTTCCTCGGCGCTGCCTGCGAGGTGGCTGCCATCTGTTTTGCGGCATCATGGCTGCC
CTTCGGCCTCTGGTGAAGCCCAAGATCGTCAAAAAGAGGACCAAGAAGTTCATCAGGCACCAGT
CGGACCGATATGTGAAAATTAAGCGAAACTGGCGGAAACCCAGAGGCATCGACAACAGGGTGCG
GAGAAGATTCAAGGGCCAGATCCTGATGCCCAACATTGGTTACGGGAGTAACAAGAAAACCAAG
CACATGCTGCCTAGCGGCTTCCGGAAGTTTCTGGTCCACAATGTCAAGGAGCTGGAAGTGCTGC
TGATGTGCAACAAATCTTACTGTGCTGAGATTGCTCACAATGTGTCCTCTAAGAACCGAAAAGC
CATCGTAGAAAGAGCAGCACAGCTGGCCATCAGAGTCACCAATCCCAACGCCAGGCTACGCAGC
GAAGAGAATGAATAGATGGCTTGTGTGCCTGTTTTGTGTTCAAATAAAACCACAAAAACTGCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_037358	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH61562	(Get FASTA)	NCBI Sequence Viewer
	AAH82797	(Get FASTA)	NCBI Sequence Viewer
	CAA29777	(Get FASTA)	NCBI Sequence Viewer
	EDM02141	(Get FASTA)	NCBI Sequence Viewer
	EDM02142	(Get FASTA)	NCBI Sequence Viewer
	P62912	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_037358 ⟸ NM_013226
- UniProtKB:	Q63ZV8 (UniProtKB/Swiss-Prot), P62912 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNK KTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNAR LRSEENE hide sequence

RefSeq Acc Id:

ENSRNOP00000014493 ⟸ ENSRNOT00000014493

RefSeq Acc Id:

ENSRNOP00000041638 ⟸ ENSRNOT00000046799

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P62912-F1-model_v2	AlphaFold	P62912	1-135	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693326

Promoter ID:

EPDNEW_R3851

Type:

multiple initiation site

Name:

Rpl32_1

Description:

ribosomal protein L32

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	147,719,044 - 147,719,104	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621203	AgrOrtholog
BioCyc Gene	G2FUF-43313	BioCyc
Ensembl Genes	ENSRNOG00000010746	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSRNOP00000014493	ENTREZGENE
	ENSRNOP00000014493.4	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000014493	ENTREZGENE
	ENSRNOT00000014493.6	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:6921029	IMAGE-MGC_LOAD
	IMAGE:7301263	IMAGE-MGC_LOAD
InterPro	Ribosomal_L32e	UniProtKB/Swiss-Prot
	Ribosomal_L32e_CS	UniProtKB/Swiss-Prot
	Ribosomal_L32e_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:28298	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:105483	IMAGE-MGC_LOAD
	MGC:72905	IMAGE-MGC_LOAD
NCBI Gene	28298	ENTREZGENE
PANTHER	60S RIBOSOMAL PROTEIN L32	UniProtKB/Swiss-Prot
	PTHR23413	UniProtKB/Swiss-Prot
Pfam	Ribosomal_L32e	UniProtKB/Swiss-Prot
PhenoGen	Rpl32	PhenoGen
PROSITE	RIBOSOMAL_L32E	UniProtKB/Swiss-Prot
SMART	Ribosomal_L32e	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52042	UniProtKB/Swiss-Prot
UniProt	P62912	ENTREZGENE
	Q63ZV8	ENTREZGENE
	RL32_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	P02433	UniProtKB/Swiss-Prot
	Q63ZV8	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Rpl32	ribosomal protein L32			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Rpl32	ribosomal protein L32			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations