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Gene: Cox5a (cytochrome c oxidase subunit 5A) Rattus norvegicus
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Symbol: Cox5a
Name: cytochrome c oxidase subunit 5A
Description: Exhibits cytochrome-c oxidase activity. Predicted to be involved in mitochondrial electron transport, cytochrome c to oxygen. Predicted to localize to the mitochondrial respiratory chain complex IV. Orthologous to human COX5A (cytochrome c oxidase subunit 5A); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH (RS)-amphetamine; 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cytochrome c oxidase polypeptide Va; cytochrome c oxidase subunit 5A, mitochondrial; cytochrome c oxidase, subunit Va
Orthologs:
Homo sapiens (human) : COX5A (cytochrome c oxidase subunit 5A)  HGNC  Alliance
Mus musculus (house mouse) : Cox5a (cytochrome c oxidase subunit 5A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102005653 (cytochrome c oxidase subunit 5A, mitochondrial)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100988094 (cytochrome c oxidase subunit 5A, mitochondrial)
Canis lupus familiaris (dog) : COX5A (cytochrome c oxidase subunit Va)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101971648 (cytochrome c oxidase subunit 5A, mitochondrial)
Sus scrofa (pig) : LOC100156967 (cytochrome c oxidase subunit 5A, mitochondrial)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0862,298,358 - 62,309,765 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0862,075,344 - 62,087,001 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4861,264,971 - 61,276,380 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1861,284,024 - 61,295,434 (+)NCBI
Celera857,388,557 - 57,399,970 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cox5a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620607
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.