Gene: Sox9 (SRY box 9) Rattus norvegicus
Symbol: Sox9
Name: SRY box 9
Description: ENCODES a protein that exhibits bHLH transcription factor binding; DNA binding transcription factor activity; enhancer binding; INVOLVED IN cAMP-mediated signaling; cartilage development; positive regulation of gene expression; ASSOCIATED WITH Fractures, Bone; 46, XX Testicular Disorders of Sex Development (ortholog); 46,XX Sex Reversal 1 (ortholog); FOUND IN transcription factor complex; nuclear transcription factor complex (ortholog); nucleoplasm (ortholog); INTERACTS WITH 3-chloropropane-1,2-diol; all-trans-retinoic acid; ammonium chloride
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC100361122; LOC363699; SRY; SRY (sex determining region Y)-box 9; SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal); SRY-box containing gene 9; transcription factor SOX-9
Homo sapiens (human) : SOX9 (SRY-box 9)  HGNC  Alliance
Mus musculus (house mouse) : Sox9 (SRY (sex determining region Y)-box 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox9 (SRY-box 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX9 (SRY-box 9)
Canis lupus familiaris (dog) : SOX9 (SRY-box 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox9 (SRY-box 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.010101,288,528 - 101,294,030 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010100,964,754 - 100,970,581 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410102,392,187 - 102,394,256 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110102,408,236 - 102,408,622 (+)NCBI
Celera1096,424,278 - 96,429,703 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Sox9
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620474
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-04-10
Status: ACTIVE