Gene: Sox9 (SRY box 9) Rattus norvegicus
Symbol: Sox9
Name: SRY box 9
Description: ENCODES a protein that exhibits bHLH transcription factor binding; DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription factor activity; INVOLVED IN cAMP-mediated signaling; cartilage development; positive regulation of gene expression; ASSOCIATED WITH Bone Fractures; 46, XX Testicular Disorders of Sex Development (ortholog); 46,XX Sex Reversal 2 (ortholog); FOUND IN transcription factor complex; nuclear transcription factor complex (ortholog); nucleoplasm (ortholog); INTERACTS WITH (S)-nicotine; 3-chloropropane-1,2-diol; all-trans-retinoic acid
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC100361122; LOC363699; SRY; SRY (sex determining region Y)-box 9; SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal); SRY-box containing gene 9; transcription factor SOX-9
Homo sapiens (human) : SOX9 (SRY-box 9)  HGNC  Alliance
Mus musculus (house mouse) : Sox9 (SRY (sex determining region Y)-box 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox9 (SRY-box 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX9 (SRY-box 9)
Canis lupus familiaris (dog) : SOX9 (SRY-box 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox9 (SRY-box 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.010101,288,528 - 101,294,030 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010100,964,754 - 100,970,581 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410102,392,187 - 102,394,256 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110102,408,236 - 102,408,622 (+)NCBI
Celera1096,424,278 - 96,429,703 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Sox9
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620474
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE