Gene: Efna1 (ephrin A1) Rattus norvegicus
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Symbol: Efna1
Name: ephrin A1
Description: ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cell migration (ortholog); endocardial cushion to mesenchymal transition involved in heart valve formation (ortholog); PARTICIPATES IN altered ephrin - ephrin receptor bidirectional signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN anchored component of plasma membrane (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B61; EPH-related receptor tyrosine kinase ligand 1; ephrin-A1; immediate early response protein B61; LERK-1
Orthologs:
Homo sapiens (human) : EFNA1 (ephrin A1)  HGNC  Alliance
Mus musculus (house mouse) : Efna1 (ephrin A1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efna1 (ephrin A1)
Pan paniscus (bonobo/pygmy chimpanzee) : EFNA1 (ephrin A1)
Canis lupus familiaris (dog) : EFNA1 (ephrin A1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efna1 (ephrin A1)
Sus scrofa (pig) : EFNA1 (ephrin A1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02188,588,808 - 188,596,156 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02208,002,153 - 208,010,763 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,444,599 - 181,451,944 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12181,394,706 - 181,402,050 (-)NCBI
Celera2168,623,896 - 168,631,240 (-)NCBICelera
Cytogenetic Map2q34NCBI
RH 3.4 Map21155.2RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Efna1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620388
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE