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Gene: Cnga4 (cyclic nucleotide gated channel subunit alpha 4) Rattus norvegicus
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Symbol: Cnga4
Name: cyclic nucleotide gated channel subunit alpha 4
Description: Exhibits cGMP binding activity; intracellular cAMP-activated cation channel activity; and intracellular cGMP-activated cation channel activity. Predicted to be involved in sensory perception of smell. Localizes to the intracellular cyclic nucleotide activated cation channel complex; perikaryon; and plasma membrane. Orthologous to human CNGA4 (cyclic nucleotide gated channel subunit alpha 4); PARTICIPATES IN calcium/calcium-mediated signaling pathway; calcium transport pathway; INTERACTS WITH ammonium chloride; bisphenol A; flavonoids.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Cgn2; CNCalpha4, CNG5; CNG channel alpha-4; CNG-4; CNG4; cyclic nucleotide gated cation channel; cyclic nucleotide gated channel alpha 4; cyclic nucleotide-gated cation channel alpha 4; cyclic nucleotide-gated cation channel alpha-4; cyclic nucleotide-gated channel alpha-4; cyclic nucleotide-gated olfactory channel subunit OCNC2; olfactory cyclic nucleotide-gated channel; rOCNC2
Orthologs:
Homo sapiens (human) : CNGA4 (cyclic nucleotide gated channel subunit alpha 4)  HGNC  Alliance
Mus musculus (house mouse) : Cnga4 (cyclic nucleotide gated channel alpha 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cnga4 (cyclic nucleotide gated channel subunit alpha 4)
Pan paniscus (bonobo/pygmy chimpanzee) : CNGA4 (cyclic nucleotide gated channel subunit alpha 4)
Canis lupus familiaris (dog) : CNGA4 (cyclic nucleotide gated channel subunit alpha 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cnga4 (cyclic nucleotide gated channel subunit alpha 4)
Sus scrofa (pig) : CNGA4 (cyclic nucleotide gated channel subunit alpha 4)
Chlorocebus sabaeus (African green monkey) : CNGA4 (cyclic nucleotide gated channel subunit alpha 4)
Heterocephalus glaber (naked mole-rat) : Cnga4 (cyclic nucleotide gated channel subunit alpha 4)
more info ...
Is Marker For: QTLs:   Gluco13  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01170,238,959 - 170,246,858 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1170,242,846 - 170,246,858 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01177,245,757 - 177,253,787 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41163,137,544 - 163,141,556 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11163,233,020 - 163,237,158 (+)NCBI
Celera1157,687,159 - 157,691,171 (+)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cnga4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619844
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.