Tapbp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 20 | 4,958,821 - 4,967,958 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 4,956,937 - 4,966,191 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 4,956,937 - 4,966,181 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 5,681,446 - 5,689,397 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 5,043,191 - 5,051,142 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 5,523,938 - 5,531,891 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 5,468,056 - 5,476,007 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 5,468,078 - 5,476,193 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 7,526,668 - 7,534,862 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 5,109,807 - 5,117,758 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 20 | 5,110,035 - 5,117,974 (-) | NCBI | | | | | Celera | 20 | 6,542,153 - 6,550,105 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | p12 | NCBI | | | | |
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TAPBP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 33,299,694 - 33,314,078 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 33,299,694 - 33,314,284 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 33,267,471 - 33,281,855 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 33,375,449 - 33,389,967 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 33,380,022 - 33,389,967 | NCBI | | | | | Celera | 6 | 34,821,829 - 34,836,529 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p21.32 | NCBI | | | | | HuRef | 6 | 33,009,105 - 33,023,734 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 33,269,408 - 33,284,098 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 33,121,056 - 33,135,440 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tapbp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 17 | 34,138,452 - 34,148,264 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 34,134,873 - 34,148,266 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 33,919,478 - 33,929,290 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 33,915,899 - 33,929,292 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 34,056,423 - 34,066,235 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 33,529,932 - 33,539,744 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 36,672,402 - 36,682,204 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | B1 | NCBI | | | | | cM Map | 17 | 17.98 | NCBI | | | | |
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Tapbp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955437 | 1,858,328 - 1,866,233 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955437 | 1,860,057 - 1,865,645 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TAPBP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 47,777,596 - 47,792,589 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 43,649,035 - 43,664,555 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 32,871,768 - 32,886,679 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 33,986,058 - 34,000,190 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 33,986,058 - 34,000,190 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TAPBP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 12 | 2,740,276 - 2,751,808 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 2,740,276 - 2,751,808 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 2,821,151 - 2,832,681 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 3,071,694 - 3,083,242 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 3,071,399 - 3,083,239 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 2,738,920 - 2,750,427 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 2,820,202 - 2,831,740 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 2,895,118 - 2,906,650 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tapbp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 38,393,629 - 38,405,741 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936476 | 25,554,403 - 25,564,330 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936476 | 25,554,186 - 25,566,634 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TAPBP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 29,663,495 - 29,673,634 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 29,663,491 - 29,673,453 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 34,167,262 - 34,176,655 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TAPBP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 17 | 38,762,934 - 38,776,247 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 17 | 38,763,206 - 38,773,768 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666044 | 33,134,294 - 33,149,129 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tapbp (Heterocephalus glaber - naked mole-rat) |
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