Gene: Efnb1 (ephrin B1) Rattus norvegicus
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Symbol: Efnb1
Name: ephrin B1
Description: ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN nervous system development; presynapse assembly; axon guidance (ortholog); PARTICIPATES IN altered ephrin - ephrin receptor bidirectional signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH autistic disorder (ortholog); craniofrontonasal syndrome (ortholog); craniosynostosis (ortholog); FOUND IN glutamatergic synapse; integral component of presynaptic membrane; synapse; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: EFL-3; ELK ligand; ELK-L; EPH-related receptor tyrosine kinase ligand 2; ephrin-B1; LERK-2; LERK2
Orthologs:
Homo sapiens (human) : EFNB1 (ephrin B1)  HGNC  Alliance
Mus musculus (house mouse) : Efnb1 (ephrin B1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efnb1 (ephrin B1)
Pan paniscus (bonobo/pygmy chimpanzee) : EFNB1 (ephrin B1)
Canis lupus familiaris (dog) : EFNB1 (ephrin B1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efnb1 (ephrin B1)
Sus scrofa (pig) : EFNB1 (ephrin B1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X68,891,227 - 68,904,034 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X69,764,314 - 69,777,121 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X87,163,176 - 87,175,982 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X87,236,467 - 87,249,273 (+)NCBI
CeleraX64,624,957 - 64,637,749 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Efnb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2540
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE