Eif4e3 (eukaryotic translation initiation factor 4E family member 3) - Rat Genome Database

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Gene: Eif4e3 (eukaryotic translation initiation factor 4E family member 3) Rattus norvegicus
Analyze
Symbol: Eif4e3
Name: eukaryotic translation initiation factor 4E family member 3
RGD ID: 1586185
Description: Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex. Orthologous to human EIF4E3 (eukaryotic translation initiation factor 4E family member 3); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: eukaryotic translation initiation factor 4E member 3; eukaryotic translation initiation factor 4E type 3; LOC297481; similar to eukaryotic translation initiation factor 4E member 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84133,709,802 - 133,858,398 (-)NCBIGRCr8
mRatBN7.24132,258,502 - 132,301,808 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4132,258,502 - 132,301,808 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4137,675,414 - 137,719,126 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04133,456,200 - 133,499,910 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04132,074,463 - 132,118,181 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04132,068,581 - 132,111,092 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4132,068,598 - 132,111,079 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04196,560,131 - 196,602,330 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44134,470,883 - 134,514,084 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4121,118,126 - 121,161,071 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (EXP)
17beta-estradiol 3-benzoate  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
cobalt dichloride  (EXP)
diarsenic trioxide  (ISO)
diethylstilbestrol  (EXP)
dorsomorphin  (ISO)
endosulfan  (EXP)
folic acid  (ISO)
fulvestrant  (ISO)
ketamine  (EXP)
lead diacetate  (ISO)
mercury dibromide  (ISO)
methylmercury chloride  (ISO)
N-nitrosodimethylamine  (EXP)
nickel dichloride  (ISO)
nicotine  (ISO)
nitrofen  (EXP)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
trametinib  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Eif4e3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84133,709,802 - 133,858,398 (-)NCBIGRCr8
mRatBN7.24132,258,502 - 132,301,808 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4132,258,502 - 132,301,808 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4137,675,414 - 137,719,126 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04133,456,200 - 133,499,910 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04132,074,463 - 132,118,181 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04132,068,581 - 132,111,092 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4132,068,598 - 132,111,079 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04196,560,131 - 196,602,330 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44134,470,883 - 134,514,084 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4121,118,126 - 121,161,071 (-)NCBICelera
Cytogenetic Map4q34NCBI
EIF4E3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38371,659,363 - 71,754,773 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl371,675,414 - 71,754,773 (-)EnsemblGRCh38hg38GRCh38
GRCh37371,724,565 - 71,803,924 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36371,814,568 - 71,885,465 (-)NCBINCBI36Build 36hg18NCBI36
Build 34371,814,567 - 71,885,465NCBI
Celera371,659,031 - 71,734,517 (-)NCBICelera
Cytogenetic Map3p13NCBI
HuRef371,730,725 - 71,780,383 (-)NCBIHuRef
CHM1_1371,680,022 - 71,755,333 (-)NCBICHM1_1
T2T-CHM13v2.0371,698,509 - 71,794,043 (-)NCBIT2T-CHM13v2.0
Eif4e3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39699,599,008 - 99,669,834 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl699,602,096 - 99,643,732 (-)EnsemblGRCm39 Ensembl
GRCm38699,621,879 - 99,692,873 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl699,625,135 - 99,666,771 (-)EnsemblGRCm38mm10GRCm38
MGSCv37699,575,131 - 99,616,765 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36699,590,600 - 99,632,234 (-)NCBIMGSCv36mm8
Celera6101,489,380 - 101,530,927 (-)NCBICelera
Cytogenetic Map6D3NCBI
cM Map645.98NCBI
Eif4e3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542116,354,282 - 16,419,304 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542116,354,282 - 16,520,422 (+)NCBIChiLan1.0ChiLan1.0
EIF4E3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2271,641,978 - 71,684,653 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1371,646,766 - 71,689,440 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0371,617,040 - 71,694,523 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1372,975,451 - 73,049,525 (-)NCBIpanpan1.1PanPan1.1panPan2
EIF4E3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12020,299,757 - 20,349,561 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2020,327,676 - 20,438,998 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2020,277,217 - 20,327,043 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02020,334,599 - 20,384,614 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2020,308,954 - 21,026,250 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12020,024,761 - 20,065,042 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02020,373,429 - 20,413,727 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02020,436,369 - 20,486,225 (+)NCBIUU_Cfam_GSD_1.0
Eif4e3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049423,229,927 - 3,286,977 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366033,227,138 - 3,245,939 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366033,228,091 - 3,285,311 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF4E3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1353,083,645 - 53,124,240 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11353,080,200 - 53,152,335 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21358,771,253 - 58,816,633 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EIF4E3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12232,635,144 - 32,708,932 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041134,070,942 - 134,144,820 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif4e3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247736,219,199 - 6,267,512 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247736,047,763 - 6,264,641 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eif4e3
269 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:477
Count of miRNA genes:234
Interacting mature miRNAs:293
Transcripts:ENSRNOT00000013719
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
70201Gcr1Gastric cancer resistance QTL 12.7stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)4120260281147278687Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
2293840Kiddil9Kidney dilation QTL 92.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)4120926564148090731Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
12798527Anxrr58Anxiety related response QTL 584.110.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4119463257147278687Rat

Markers in Region
AI502630  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21202,988,457 - 202,988,638 (+)MAPPERmRatBN7.2
mRatBN7.24132,277,197 - 132,277,459 (+)MAPPERmRatBN7.2
Rnor_6.04132,086,377 - 132,086,638NCBIRnor6.0
Rnor_6.01221,056,223 - 221,056,403NCBIRnor6.0
Rnor_5.04196,577,927 - 196,578,188UniSTSRnor5.0
Rnor_5.01227,991,545 - 227,991,725UniSTSRnor5.0
RGSC_v3.41208,326,092 - 208,326,272UniSTSRGSC3.4
RGSC_v3.44134,489,579 - 134,489,840UniSTSRGSC3.4
Celera4121,136,822 - 121,137,083UniSTS
Celera1200,524,203 - 200,524,383UniSTS
RH 3.4 Map4808.61UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map1q43UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000013719   ⟹   ENSRNOP00000013719
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4132,258,502 - 132,301,808 (-)Ensembl
Rnor_6.0 Ensembl4132,068,598 - 132,111,079 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097343   ⟹   ENSRNOP00000090799
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4132,264,509 - 132,301,808 (-)Ensembl
RefSeq Acc Id: NM_001106612   ⟹   NP_001100082
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84133,815,038 - 133,858,339 (-)NCBI
mRatBN7.24132,258,502 - 132,301,808 (-)NCBI
Rnor_6.04132,068,581 - 132,111,092 (-)NCBI
Rnor_5.04196,560,131 - 196,602,330 (-)NCBI
RGSC_v3.44134,470,883 - 134,514,084 (-)RGD
Celera4121,118,126 - 121,161,071 (-)RGD
Sequence:
RefSeq Acc Id: XM_063285846   ⟹   XP_063141916
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84133,709,802 - 133,858,397 (-)NCBI
RefSeq Acc Id: XM_063285847   ⟹   XP_063141917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84133,816,901 - 133,858,397 (-)NCBI
RefSeq Acc Id: XR_010065627
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84133,821,958 - 133,858,398 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001100082 (Get FASTA)   NCBI Sequence Viewer  
  XP_063141916 (Get FASTA)   NCBI Sequence Viewer  
  XP_063141917 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI68936 (Get FASTA)   NCBI Sequence Viewer  
  EDL91436 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000013719.4
  ENSRNOP00000090799.1
RefSeq Acc Id: NP_001100082   ⟸   NM_001106612
- UniProtKB: B5DF58 (UniProtKB/TrEMBL),   A6IBG8 (UniProtKB/TrEMBL),   A0A8I6AF02 (UniProtKB/TrEMBL),   F7F2U2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000013719   ⟸   ENSRNOT00000013719
Ensembl Acc Id: ENSRNOP00000090799   ⟸   ENSRNOT00000097343
RefSeq Acc Id: XP_063141916   ⟸   XM_063285846
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063141917   ⟸   XM_063285847
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B5DF58-F1-model_v2 AlphaFold B5DF58 1-207 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693272
Promoter ID:EPDNEW_R3797
Type:initiation region
Name:Eif4e3_1
Description:eukaryotic translation initiation factor 4E family member 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04132,111,085 - 132,111,145EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1586185 AgrOrtholog
BioCyc Gene G2FUF-43583 BioCyc
Ensembl Genes ENSRNOG00000010301 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013719.7 UniProtKB/TrEMBL
  ENSRNOT00000097343.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.760.10 UniProtKB/TrEMBL
InterPro TIF_eIF4e-like_dom UniProtKB/TrEMBL
  TIF_eIF_4E UniProtKB/TrEMBL
KEGG Report rno:297481 UniProtKB/TrEMBL
NCBI Gene 297481 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TYPE 3 UniProtKB/TrEMBL
  TIF_eIF_4E UniProtKB/TrEMBL
Pfam IF4E UniProtKB/TrEMBL
PhenoGen Eif4e3 PhenoGen
RatGTEx ENSRNOG00000010301 RatGTEx
Superfamily-SCOP TIF_eIF_4E UniProtKB/TrEMBL
UniProt A0A8I6AF02 ENTREZGENE, UniProtKB/TrEMBL
  A6IBG8 ENTREZGENE, UniProtKB/TrEMBL
  B5DF58 ENTREZGENE
  F7F2U2 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary B5DF58 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-04 Eif4e3  eukaryotic translation initiation factor 4E member 3  LOC297481  similar to eukaryotic translation initiation factor 4E member 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC297481  similar to eukaryotic translation initiation factor 4E member 3      Symbol and Name status set to provisional 70820 PROVISIONAL