Gene: Cntnap5b (contactin associated protein-like 5B) Rattus norvegicus
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Symbol: Cntnap5b
Name: contactin associated protein-like 5B
Description: ENCODES a protein that exhibits calcium ion binding (inferred); INVOLVED IN cell adhesion (inferred); FOUND IN integral component of membrane (inferred); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); arsenite(3-) (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Caspr5-2; Caspr5-3; Cell recognition molecule Caspr5-2; cell recognition molecule Caspr5-3; Cell recognition molecule Caspr5b; cell recognition molecule Caspr5c; Cntnap5c; contactin associated protein-like 5-2; contactin associated protein-like 5-3; Contactin-associated protein like 5-2; contactin-associated protein like 5-3; Contactin-associated protein-like 5b; contactin-associated protein-like 5c; LOC301650; RGD1565194; similar to contactin associated protein-like 5 isoform 1
Orthologs:
Homo sapiens (human) : CNTNAP5 (contactin associated protein like 5)  HGNC  AGR
Mus musculus (house mouse) : Cntnap5a (contactin associated protein-like 5A)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Cntnap5 (contactin associated protein like 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CNTNAP5 (contactin associated protein like 5)
Canis lupus familiaris (dog) : CNTNAP5 (contactin associated protein like 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cntnap5 (contactin associated protein like 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01321,678,088 - 22,591,082 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01326,870,922 - 27,675,050 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01327,711,790 - 27,774,438 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4137,714,567 - 8,649,647 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1317,878,579 - 18,758,479 (+)NCBICelera
Cytogenetic Map13p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cntnap5b
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565194
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2017-05-30
Status: ACTIVE