Srf (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 9 | 21,924,050 - 21,933,338 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 14,426,453 - 14,435,734 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 14,426,472 - 14,435,733 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 23,010,176 - 23,019,436 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 28,073,247 - 28,082,508 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 26,373,557 - 26,382,817 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 16,737,637 - 16,747,226 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 16,737,642 - 16,747,225 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 15,642,584 - 15,652,178 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 9,788,378 - 9,797,639 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 9 | 12,173,971 - 12,183,234 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q12 | NCBI | | | | |
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SRF (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 43,171,269 - 43,181,506 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 43,171,269 - 43,181,506 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 43,139,007 - 43,149,244 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 43,246,898 - 43,257,222 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 43,247,014 - 43,257,221 | NCBI | | | | | Celera | 6 | 44,691,142 - 44,701,465 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | p21.1 | NCBI | | | | | HuRef | 6 | 42,855,575 - 42,865,934 (+) | NCBI | | HuRef | | | CHM1_1 | 6 | 43,141,808 - 43,152,132 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 43,000,031 - 43,010,279 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Srf (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 17 | 46,857,764 - 46,869,194 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 46,859,255 - 46,867,101 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 46,546,838 - 46,558,267 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 46,548,329 - 46,556,175 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 46,683,788 - 46,693,111 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 46,010,028 - 46,019,351 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 49,982,837 - 49,992,041 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | C | NCBI | | | | | cM Map | 17 | 22.9 | NCBI | | | | |
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Srf (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955437 | 9,098,968 - 9,107,057 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955437 | 9,100,546 - 9,109,305 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SRF (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 57,671,108 - 57,681,467 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 53,541,022 - 53,551,267 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 42,763,099 - 42,773,332 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 44,057,192 - 44,066,768 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 44,057,192 - 44,066,768 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SRF (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 11,664,441 - 11,673,846 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 11,664,527 - 11,671,533 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 11,691,502 - 11,700,834 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 12,146,868 - 12,156,424 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 12,146,882 - 12,156,417 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 11,674,421 - 11,683,753 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 11,758,840 - 11,768,172 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 11,853,634 - 11,862,966 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Srf (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 47,170,709 - 47,180,262 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936476 | 16,782,233 - 16,789,130 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936476 | 16,779,941 - 16,789,499 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SRF (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 38,213,487 - 38,222,144 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 38,213,300 - 38,223,686 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 43,712,387 - 43,724,048 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SRF (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 17 | 28,983,161 - 28,993,465 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 17 | 28,983,002 - 28,992,995 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666044 | 43,231,123 - 43,241,353 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Srf (Heterocephalus glaber - naked mole-rat) |
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