Mknk1 (MAPK interacting serine/threonine kinase 1)

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Gene: Mknk1 (MAPK interacting serine/threonine kinase 1) Rattus norvegicus

Analyze

Symbol:

Mknk1

Name:

MAPK interacting serine/threonine kinase 1

RGD ID:

1559603

Description:

Exhibits protein serine/threonine kinase activity. Involved in peptidyl-serine phosphorylation and regulation of translational initiation. Predicted to localize to cytoplasm and nucleoplasm. Orthologous to human MKNK1 (MAPK interacting serine/threonine kinase 1); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; cyclooxygenase mediated pathway of arachidonic acid metabolism; p38 MAPK signaling pathway; INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

MAP kinase signal-integrating kinase 1; MAP kinase-interacting serine/threonine kinase 1; MAP kinase-interacting serine/threonine-protein kinase 1; MAPK signal-integrating kinase 1; MGC112775; mnk1; similar to map kinase interacting kinase

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	5	134,691,852 - 134,730,887 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	134,691,881 - 134,730,893 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	136,100,236 - 136,141,344 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	5	127,849,685 - 127,888,824 (+)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-anisomycin (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4-hydroxynon-2-enal (ISO)

4-vinylcyclohexene dioxide (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

antirheumatic drug (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

choline (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

D-glucitol (ISO)

diarsenic trioxide (ISO)

doxorubicin (ISO)

ethanol (ISO)

flutamide (EXP)

folic acid (ISO)

hydrogen peroxide (ISO)

L-methionine (ISO)

lipopolysaccharide (ISO)

methoxyacetic acid (EXP)

methyl methanesulfonate (ISO)

nickel dichloride (ISO)

nickel subsulfide (ISO)

paracetamol (ISO)

phorbol 13-acetate 12-myristate (ISO)

quercetin (ISO)

SB 203580 (ISO)

sorafenib (ISO)

sunitinib (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

extrinsic apoptotic signaling pathway in absence of ligand (ISO)

intracellular signal transduction (IBA,ISO)

peptidyl-serine phosphorylation (IBA,IMP,ISO)

protein autophosphorylation (IBA)

protein phosphorylation (IEA,ISO)

regulation of translational initiation (IMP)

response to salt stress (ISO)

Cellular Component

cytoplasm (IBA)

cytosol (IC)

nucleoplasm (ISO)

nucleus (IBA)

Molecular Function

ATP binding (IEA,ISO)

calcium-dependent protein serine/threonine kinase activity (IBA)

calmodulin binding (IBA)

calmodulin-dependent protein kinase activity (IBA)

metal ion binding (IEA)

protein binding (ISO)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IEA,IMP,ISO)

protein threonine kinase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

cyclooxygenase mediated pathway of arachidonic acid metabolism (ISO)

insulin signaling pathway (IEA)

mitogen activated protein kinase signaling pathway (IEA)

p38 MAPK signaling pathway (ISO)

the extracellular signal-regulated Raf/Mek/Erk signaling pathway (IMP,ISO)

References

References - curated


1.	Chen S, etal., J Cereb Blood Flow Metab. 2007 May;27(5):939-49. Epub 2006 Aug 30.
2.	Gaestel M Nat Rev Mol Cell Biol. 2006 Feb;7(2):120-30.
3.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Niknami M, etal., Int J Biochem Cell Biol. 2009 May;41(5):994-7. doi: 10.1016/j.biocel.2008.07.017. Epub 2008 Aug 8.
5.	Origanti S and Shantz LM, Cancer Res. 2007 May 15;67(10):4834-42.
6.	Pipeline to import KEGG annotations from KEGG into RGD
7.	RGD automated data pipeline
8.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	RGD automated import pipeline for gene-chemical interactions
10.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:9155017	PMID:9155018	PMID:15489334	PMID:17130135	PMID:17903173	PMID:25453757

Genomics

Comparative Map Data

Mknk1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	5	134,691,852 - 134,730,887 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	134,691,881 - 134,730,893 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	136,100,236 - 136,141,344 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	5	127,849,685 - 127,888,824 (+)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

MKNK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	1	46,557,407 - 46,616,843 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38.p13 Ensembl	1	46,557,408 - 46,616,843 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	1	46,557,407 - 46,604,311 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	1	47,023,079 - 47,069,966 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	46,795,677 - 46,842,473 (-)	NCBI	NCBI36		hg18	NCBI36
Celera	1	45,310,474 - 45,357,318 (-)	NCBI
Cytogenetic Map	1	p33	NCBI
HuRef	1	45,138,599 - 45,185,470 (-)	NCBI		HuRef
CHM1_1	1	47,140,090 - 47,186,977 (-)	NCBI		CHM1_1

Mknk1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	115,695,140 - 115,736,453 (+)	NCBI	GRCm39		mm39
GRCm38	4	115,837,943 - 115,879,256 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	115,839,198 - 115,879,250 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	115,511,851 - 115,551,853 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	4	115,337,178 - 115,377,180 (+)	NCBI			mm8
Celera	4	114,578,978 - 114,618,975 (+)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI

Mknk1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	11,707,614 - 11,750,562 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	11,697,946 - 11,750,258 (+)	NCBI	ChiLan1.0	ChiLan1.0

MKNK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	47,215,693 - 47,262,324 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	47,215,693 - 47,262,317 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	1	45,859,888 - 45,906,840 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

MKNK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	15	13,857,553 - 13,898,723 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	15	13,857,495 - 13,898,709 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Mknk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936474	27,568,325 - 27,611,315 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MKNK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	164,887,764 - 164,933,522 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	164,887,707 - 164,933,526 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	152,376,955 - 152,423,383 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MKNK1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	20	86,204,502 - 86,250,712 (+)	Ensembl
ChlSab1.1	20	86,202,953 - 86,250,574 (+)	NCBI

Mknk1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624906	2,442,590 - 2,494,724 (-)	NCBI

Position Markers

D5Mco7

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	5	134,693,892 - 134,694,217	NCBI	Rnor6.0
Rnor_5.0	5	138,478,340 - 138,478,665	UniSTS	Rnor5.0
RGSC_v3.4	5	136,102,214 - 136,102,540	RGD	RGSC3.4
RGSC_v3.4	5	136,102,215 - 136,102,540	UniSTS	RGSC3.4
RGSC_v3.1	5	136,107,440 - 136,107,766	RGD
Celera	5	127,851,664 - 127,851,975	UniSTS
Cytogenetic Map	5	q36	UniSTS

BI301014

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	5	134,712,918 - 134,713,069	NCBI	Rnor6.0
Celera	5	127,870,625 - 127,870,777	UniSTS
Cytogenetic Map	5	q36	UniSTS
RH 3.4 Map	5	838.3	UniSTS

QTLs in Region (Rnor_6.0)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	1	136640934	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	31926122	136640934	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35788756	147487820	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40777918	154732375	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	47745646	167946134	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	51418671	147487820	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	56991667	137729065	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	61086525	149030144	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	61612600	168109659	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	71552569	157225114	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	84963058	173504662	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	91585539	136585539	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	91585539	136585539	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	91585539	136585539	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	91884213	136884213	Rat
631527	Tls1	T-lymphoma susceptibility QTL 1	0	0.001	thymus integrity trait (VT:0010555)	post-insult time to onset of T-cell lymphoma (CMO:0001907)	5	93273130	138273130	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	97921932	149030144	Rat
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	100723739	153577831	Rat
2317753	Glom24	Glomerulus QTL 24	3.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	5	101265591	141912026	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	102945579	154732228	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	107119214	152119214	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111278451	156278451	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112279412	157279412	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112279412	157279412	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112279412	157279412	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112279412	157279412	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112279412	157279412	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114140832	159140832	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114140832	159140832	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116767924	161767924	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116767924	161767924	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116767924	161767924	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116767924	161767924	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125455818	149568944	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	125455818	157225114	Rat
1641920	Colcs1	Colorectal carcinoma susceptibility QTL 1	2.99	0.0055	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	5	128687766	173687766	Rat
7394710	Emca12	Estrogen-induced mammary cancer QTL 12			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	129038716	139099229	Rat
1300122	Wbc1	White blood cell count QTL 1	2.75		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	5	130531300	145726262	Rat
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	131077716	173707219	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	132551937	173707219	Rat
1581505	Rf54	Renal function QTL 54			kidney physiology trait (VT:0002136)	kidney 20-HETE level (CMO:0001854)	5	133313668	138454239	Rat
7365049	Bp359	Blood pressure QTL 359			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133351969	140120264	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133943857	173707219	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	133943857	173707219	Rat
634349	Bp139	Blood pressure QTL 139		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	134197905	173707219	Rat
1331803	Rf32	Renal function QTL 32	2.798		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	134502121	149030144	Rat
70156	Niddm30	Non-insulin dependent diabetes mellitus QTL 30	3.98		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	5	134502140	157212422	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	134712342	173707219	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	134712342	173707219	Rat

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	74
Count of miRNA genes:	66
Interacting mature miRNAs:	67
Transcripts:	ENSRNOT00000067655
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	33	42	27	18	27		3	33	23	32	11
Low		10	15	14	1	14	8	8	41	12	9		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001044267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AABR07049736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AABR07073138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01039293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01039294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01039295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01039296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000067655 ⟹ ENSRNOP00000061535

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	134,691,913 - 134,730,459 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000091543 ⟹ ENSRNOP00000072679

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	134,691,881 - 134,730,893 (+)	Ensembl

RefSeq Acc Id:

NM_001044267 ⟹ NP_001037732

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,691,913 - 134,730,464 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI
RGSC_v3.4	5	136,100,236 - 136,141,344 (+)	RGD
Celera	5	127,849,685 - 127,888,824 (+)	RGD

Sequence:

show sequence

TGCAGGTGGGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGAGATGGGCAGCAGTGAGCC
CCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGGCCACCGACTCT
CTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGAAGGAGCCTATG
CCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAAATCATCGAGAA
GCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACCAGTGTCAAGGA
AACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTACTTGGTCTTTG
AGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTCAATGAGCTAGA
AGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTAAAGGCATTGCT
CACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTCTCCGGTGAAAA
TTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCCATAACCACACC
AGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAGGTCTTTAGG
GACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGTCCTCTACATCA
TGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGGGACCGGGGAGA
GGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAATACGAGTTTCCC
GACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCTCCTGGTTCGAG
ATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAAGGGCAAGCTCC
AGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGGACTTGACACTC
TTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAATGAACTGGCTG
AGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCATCCAAATCTCG
CCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTTCCACACCCGCA
GGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTACGAGGTCAAAGT
GTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCACAAAGGCTCCT
GGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTTCCAAAGGGGTT
GTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAGGAACATCTCTC
TGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGGGGGCTGCTGGG
GCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACACGCCTCTTCTCC
CCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGCCTGTCTTCTCC
CCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGATCAGTCTTCCA
GTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTTCCTCATTTATC
ATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006238694 ⟹ XP_006238756

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,706,555 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

TGTCTTTGTGTGGGAAGCCATAAAATATAATATTGAGTATGTGGCTCTGCCCAGGGTTATGCTG
CTTGCACGGGAGGCTCCACAGCCCTGCTGTGGTAAAGAGCACGTATAAACTGCCGCTAACAGGG
TTTTCTGTCTAGAGCTGTAAGTACGTCTGAGAGGCCCCTGTGAGTCGCAATGCTGCCAGCTCTC
CTGCTGTTCTCCACACTGCCTGCCTGTTGGCTGTTTGGTTTGTCCACAGGCTCCTAATTGGAGT
GTGGCCAGGGGAGGGTGAAGGAGCAGAAACCACATCTGTTCGCTCCACTCTGGGTTTGCAGCAC
TGGTGAGGAATAGTTGGGACAAGGGCTGACACTAGACTGCATGCCACGGGGAAGACAGTCCAGT
CATATCCCAACCCCGTCCTGTCCCCTCCCCCAGTCCTTCAAAGACAAATGGCCTTGCACTTTGT
TTCGGAAGAATTTCTCCCAGTGCCCCGTAATGCATCTGGAGGGCATTTCTCCTTGTGATTTACC
TCACGGGTGTGGGTACCTCAGTAGCAGGATTTAATCCTTTGAGAGTTGTAGGGCTGTGTCATCC
CCGGGTAGAACTTGAGCTTGAAGCTGTTGGTGGGAGCGATATTTTCAGATGCTCTGTGGATTCT
TTGTATCCGTGTATTTTTTTTTCTGCTCTGTTCTGGGGTGTAATTGAAAACCTGCTGTGATCAG
ATCACTACCATGGACGGAGGGATGCATCTAAGTGGGGCTGTCAGACGCTTGGCTGCTTAGCTGT
GCTTTCTGGATTGTGGTGTTGAAAGTGCCATTCTGCATGCTTCCTGCTAACAACCGCCAAGAGC
CTGCCTCTGTGGGCAGCATGCATGTGGGCAGTGGCACTAAGCAACCTTCTGCCGGACCCTTGGA
GAAGGGAGTGGGCCTTCTCCTCCGTGAGCGAAGAACCTGATTCCATTTTAAAATTTCTCAGGAC
AAACCAAGCCTCAGAGCCTATGTTTATTGAAGTTTGGGGTGGAAGGCTCTCACATCCTCCACCC
GTCAGAAGGATATAGAGGCTTAATCACCCTGGTGGGGATTTAGACCCAGAGACTTCAGAGAAAT
CTTATTATTTCTAACTGCAGGCAAAGAGTATTAAGGCTCCACTCTGGATCCAGGGCATGACATG
TTCTCTAAGTAATTTATCTTTACCAGGGGAAGGCCCCTACTAGAGTGGCCTAGAAACAAACCTG
AGATGGGCTCTCATTGTTCCCCCTCTTTTCTTCCCCATCTCAGCCTCCTGCTGCTTCCTTCTGT
CCTGACCCTTCCTGCCCACAATGTCCTGTGTCTGTGTCTGCCAGCATGGGCGTCGGGTGCCTGC
CAGGGAGAGATAATGATATCTTTACAGTCCGTGGCCTCATCCAGCCTCGTAAACTTGTCAGTGG
CTGGCCTCCCTGCACCCCTTCAGAGAAGGACCAGGGAAGGGAGAAGATGGAGTGAGGGGATTGG
GGCCTTCCACAGCCCCCAGTGCAGGTCATGGAAATATTGCTCAGCTTTCTGATTTCCAGGTTCT
ATTCCTGCTCCCTCCTTACCCAGTTCGCAGCCCCAGGGACCGTCTTTCTGATGATCACAGAGAT
GGGCAGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACC
CGGGCCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGG
GAGAAGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGT
CAAAATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTG
TACCAGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGAT
TTTACTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCA
CTTCAATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCAT
ACTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGG
TGTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCAC
TCCCATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTG
GTGGAGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTG
TGGTCCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGG
CTGGGACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGC
AAATACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTA
AGCTCCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGT
GCAAGGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACC
ATGGACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAG
AGAATGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCC
TCCATCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCT
TGTTCCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAAC
CTACGAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCA
TCCACAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCT
TTTTCCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCA
GCAGGAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTG
GTGGGGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAG
ACACGCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCT
CTGCCTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAAC
CAGATCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATG
TCTTCCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTT
TAAAAATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCA
CTGTGAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCAC
TGTCTCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTT
TTGTGGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCC
CTGCTCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGC
TGTGGGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAAT
TCTCTCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238695 ⟹ XP_006238757

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,706,555 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

TGTCTTTGTGTGGGAAGCCATAAAATATAATATTGAGTATGTGGCTCTGCCCAGGGTTATGCTG
CTTGCACGGGAGGCTCCACAGCCCTGCTGTGGTAAAGAGCACGTATAAACTGCCGCTAACAGGG
TTTTCTGTCTAGAGCTGTAAGTACGTCTGAGAGGCCCCTGTGAGTCGCAATGCTGCCAGCTCTC
CTGCTGTTCTCCACACTGCCTGCCTGTTGGCTGTTTGGTTTGTCCACAGGCTCCTAATTGGAGT
GTGGCCAGGGGAGGGTGAAGGAGCAGAAACCACATCTGTTCGCTCCACTCTGGGTTTGCAGCAC
TGGTGAGGAATAGTTGGGACAAGGGCTGACACTAGACTGCATGCCACGGGGAAGACAGTCCAGT
CATATCCCAACCCCGTCCTGTCCCCTCCCCCAGTCCTTCAAAGACAAATGGCCTTGCACTTTGT
TTCGGAAGAATTTCTCCCAGTGCCCCGTAATGCATCTGGAGGGCATTTCTCCTTGTGATTTACC
TCACGGGTGTGGGTACCTCAGTAGCAGGATTTAATCCTTTGAGAGTTGTAGGGCTGTGTCATCC
CCGGGTAGAACTTGAGCTTGAAGCTGTTGGTGGGAGCGATATTTTCAGATGCTCTGTGGATTCT
TTGTATCCGTGTATTTTTTTTTCTGCTCTGTTCTGGGGTGTAATTGAAAACCTGCTGTGATCAG
ATCACTACCATGGACGGAGGGATGCATCTAAGTGGGGCTGTCAGACGCTTGGCTGCTTAGCTGT
GCTTTCTGGATTGTGGTGTTGAAAGTGCCATTCTGCATGCTTCCTGCTAACAACCGCCAAGAGC
CTGCCTCTGTGGGCAGCATGCATGTGGGCAGTGGCACTAAGCAACCTTCTGCCGGACCCTTGGA
GAAGGGAGTGGGCCTTCTCCTCCGTGAGCGAAGAACCTGATTCCATTTTAAAATTTCTCAGGAC
AAACCAAGCCTCAGAGCCTATGTTTATTGAAGTTTGGGGTGGAAGGCTCTCACATCCTCCACCC
GTCAGAAGGATATAGAGGCTTAATCACCCTGGTGGGGATTTAGACCCAGAGACTTCAGAGAAAT
CTTATTATTTCTAACTGCAGGCAAAGAGTATTAAGGCTCCACTCTGGATCCAGGGCATGACATG
TTCTCTAAGTAATTTATCTTTACCAGGGGAAGGCCCCTACTAGAGTGGCCTAGAAACAAACCTG
AGATGGGCTCTCATTGTTCCCCCTCTTTTCTTCCCCATCTCAGCCTCCTGCTGCTTCCTTCTGT
CCTGACCCTTCCTGCCCACAATGTCCTGTGTCTGTGTCTGCCAGCATGGGCGTCGGGTGCCTGC
CAGGGAGAGATAATGATATCTTTACAGTCCGTGGCCTCATCCAGCCTCGTAAACTTGTCAGTGG
CTGGCCTCCCTGCACCCCTTCAGAGAAGGACCAGGGAAGGGAGAAGATGGAGTGAGGGGATTGG
GGCCTTCCACAGCCCCCAGTGCAGGTCATGGAAATATTGCTCAGCTTTCTGATTTCCAGGTTCT
ATTCCTGCTCCCTCCTTACCCAGTTCGCAGCCCCAGGGACCGTCTTTCTGATGATCACAGAGAT
GGGCAGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACC
CGGGCCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGG
GAGAAGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGT
CAAAATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTG
TACCAGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGAT
TTTACTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCA
CTTCAATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCAT
ACTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGG
TGTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCAC
TCCCATAACCACACCAGAGCTGACCACTCCAGTCACTGTGGGGCTGACTGCGGCTGGGACCGGG
GAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAATACGAGTT
TCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCTCCTGGTT
CGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAAGGGCAAG
CTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGGTAAACGCTTCTGTCCTACCCACT
GCCTTCCCACCTTGGCCTTGACTTTCCCTCAGATCTCAGCCTTGTGTGGGGAATGGGCCCATCT
TCAGACTATGAGGCCCTCTCCAGAGAGTTCTCTGTGCCCCTCAATCCTGTCATTGATCTCCATA
GATTCCTCTCTCTCAGCTTCATCCCAGCCCTTCTTTGCAGAAAAACCTGTTTTCTACTCACTTG
AACGTGACTGTGAATCACCATTTACAAACAGAAGGTGGTCTTTATCGATGGCTCATCTTCATAG
GAGGGTTCTGCTCCTAGCAAAAGGAGAGAGGAGGGGTTCAAGGCCTCTACAAGGCAGAGGGACA
AGTTGCCACATACACTGTTAGGCACACAAGAATGATAATGGCCTCTGTGTCTTAAATACCTACC
ACATGTCCACTGTGGTACTAGAGGCATTTCATGCACAGCCATGCATTGCTCAAAGACCAGGGTC
CATCCTGAAAAAATGCAGTGAGAGAAATGCTTCAGTCCCCAGCCCTGAAAACAGAGAAGAGAAA
AGAAATACAATCTCATCATGTACAATCATCAACGATGATGCTGGGTGATACAATCACGTGGTCT
GTGTCAGCAACTGTAATTCCATGCAGCAAATGACTGTGCTATATCCATAGTCTTCACAACAAAC
AAAGGTTTCCAGAATCCATTTTAGAGATGGAATAGGTAAGAGTCAGTAAGCTCAAGTTGACTTG
TGCTAGGACACAGATGCCTTCACATCTTTGTCTGCCACTGCCTTCTCCCAGTTCTTTTGTGGAG
AGAGGCCGTTGTAGATAAATTCCTACCAAGCTTAGAGCCCAGAGGTGGGTGCTCTGAAAAAGGA
CCATTTGCCCTGACTGTCCTGCCCGGGCTCACAGCCCGTTCTCATCTTAGTCAAGCAGGGTTCG
AAACCAGGCAAAGCTGCTTAGGAGAGAGCAGCATGGGCCAGGAAAATCTGCTGGATTGTAGAGC
CCAGCAGTGGGTAGGTAGGTACATCTGAGAGCCTGCCTGGCTGATCTCAATCCCGCCACCCTCT
TCTCCATGCCTTTCCTGGCCCCTACAGAAACAGCAGCACCATGGACTTGACACTCTTCGCAGCT
GAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAATGAACTGGCTGAGGAACACG
AGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCATCCAAATCTCGCCTGGCACG
AAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTTCCACACCCGCAGGGCTCTGA
ACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTACGAGGTCAAAGTGTGAAGCTA
GCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCACAAAGGCTCCTGGGTTCCCA
CCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTTCCAAAGGGGTTGTCTTTGAA
AAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAGGAACATCTCTCTGCCCGGCT
CCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGGGGGCTGCTGGGGCTGCAGCC
TTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACACGCCTCTTCTCCCCTGCACTG
TCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGCCTGTCTTCTCCCCGGCTGAG
CAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGATCAGTCTTCCAGTCTGTAGC
ACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTTCCTCATTTATCATCCTCTTC
CGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAAAATGCGTTTGCTTTATTTTT
AACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGTGAGCCCATGGACTTCCCCAG
GCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTCTCCAACTTTAAAGACCGGTG
CCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGTGGAGAGAGGCACAAACCCAG
GGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGCTCTGAGAAATGCTGTGCCCA
CTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTGGGGTCACATAAAACAGATTT
GCACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTCTCATAACTTGTGCTTATTTT
AATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238696 ⟹ XP_006238758

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,691,857 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

GCCAGGGCCCTCCCCCTGAGTTTAGCTCCACCTCTTCCGCGTTCTCGACTGAGACCTGCAGGTG
GGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGATGGACTCTCTCTGGGATACCCAGGCT
GGCATCAGTTGCTAAGCACAAATTTCCATGCTGGAGGAGATGAAGCAGAAGCAGGCGGCAGACT
GAAGGGCACTGACTGGACAGAGGCCAGTGATAACTCCCTGCGGCTGGAAGACACCAACCTTGGG
ATTCCTCTGAGATTTCACGTTCACAAGTATCACTGCTGAGTTGAAGAACCTTGCGGTTTCAAAA
ACAACTCTCCCTCAACAAGTTCTGTTTGCAAGGAAAACCTTACCCATTTGTCCCTTCTGGCGCA
CCTCCTTCCATTGAGATCCATGCAGAATAGACCAGAGATGGGCAGCAGTGAGCCCCTTCCCATC
GTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGGCCACCGACTCTCTGCCAGGGA
AGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGAAGGAGCCTATGCCAAAGTCCA
GGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAAATCATCGAGAAGCAAGCAGGA
CACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACCAGTGTCAAGGAAACAGGAACA
TTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTACTTGGTCTTTGAGAAATTGCA
AGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTCAATGAGCTAGAAGCCAGCAGA
GTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTAAAGGCATTGCTCACCGTGATC
TGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTCTCCGGTGAAAATTTGTGACTT
TGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCCATAACCACACCAGAGCTGACC
ACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAGGTCTTTAGGGACGAGGCTA
CTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGTCCTCTACATCATGCTGAGTGG
CTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGGGACCGGGGAGAGGTATGCAGG
ATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAATACGAGTTTCCCGACAAAGACT
GGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCTCCTGGTTCGAGATGCGAAGCA
GAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAAGGGCAAGCTCCAGAAAGGGGA
CTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGGACTTGACACTCTTCGCAGCTG
AGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAATGAACTGGCTGAGGAACACGA
GGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCATCCAAATCTCGCCTGGCACGA
AGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTTCCACACCCGCAGGGCTCTGAA
CTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTACGAGGTCAAAGTGTGAAGCTAG
CCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCACAAAGGCTCCTGGGTTCCCAC
CCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTTCCAAAGGGGTTGTCTTTGAAA
AGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAGGAACATCTCTCTGCCCGGCTC
CAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGGGGGCTGCTGGGGCTGCAGCCT
TCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACACGCCTCTTCTCCCCTGCACTGT
CACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGCCTGTCTTCTCCCCGGCTGAGC
AAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGATCAGTCTTCCAGTCTGTAGCA
CGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTTCCTCATTTATCATCCTCTTCC
GTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAAAATGCGTTTGCTTTATTTTTA
ACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGTGAGCCCATGGACTTCCCCAGG
CAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTCTCCAACTTTAAAGACCGGTGC
CTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGTGGAGAGAGGCACAAACCCAGG
GCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGCTCTGAGAAATGCTGTGCCCAC
TGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTGGGGTCACATAAAACAGATTTG
CACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTCTCATAACTTGTGCTTATTTTA
ATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238697 ⟹ XP_006238759

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,691,852 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

CTTCTGCCAGGGCCCTCCCCCTGAGTTTAGCTCCACCTCTTCCGCGTTCTCGACTGAGACCTGC
AGGTGGGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGATTTCCATGCTGGAGGAGATGA
AGCAGAAGCAGGCGGCAGACTGAAGGGCACTGACTGGACAGAGGCCAGTGATAACTCCCTGCGG
CTGGAAGACACCAACCTTGGGATTCCTCTGAGATTTCACGTTCACAAGTATCACTGCTGAGTTG
AAGAACCTTGCGGTTTCAAAAACAACTCTCCCTCAACAAGTTCTGTTTGCAAGGAAAACCTTAC
CCATTTGTCCCTTCTGGCGCACCTCCTTCCATTGAGATCCATGCAGAATAGACCAGAGATGGGC
AGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGG
CCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGA
AGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAA
ATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACC
AGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTA
CTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTC
AATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTA
AAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTC
TCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCC
ATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGG
AGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGT
CCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGG
GACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAAT
ACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCT
CCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAA
GGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGG
ACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAA
TGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCA
TCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTT
CCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTAC
GAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCA
CAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTT
CCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAG
GAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGG
GGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACAC
GCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGC
CTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGA
TCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTT
CCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAA
AATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGT
GAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTC
TCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGT
GGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGC
TCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTG
GGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTC
TCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238698 ⟹ XP_006238760

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,691,857 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

GCCAGGGCCCTCCCCCTGAGTTTAGCTCCACCTCTTCCGCGTTCTCGACTGAGACCTGCAGGTG
GGGGTGCGCGCGGCCGTTCCCGCGGTGGTCAACTAAGATGGACTCTCTCTGGGATACCCAGGCT
GGCATCAGTTGCTAAGCACAAATTTCCATGCTGGAGGAGATGAAGCAGAAGCAGGCGGCAGACT
GAAGGGCACTGACTGGACAGAGGCCAGTGATAACTCCCTGCGGCTGGAAGACACCAACCTTGGG
ATTCCTCTGAGATTTCACGTTCACAAGTATCACTGCTGAGTTGAAGAACCTTGCGGAGATGGGC
AGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCCGGG
CCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGGAGA
AGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTCAAA
ATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGTACC
AGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATTTTA
CTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCACTTC
AATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATACTA
AAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGTGTC
TCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACTCCC
ATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGG
AGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGTGGT
CCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGCTGG
GACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAAT
ACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCT
CCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAA
GGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCATGG
ACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGAGAA
TGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCTCCA
TCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTTGTT
CCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACCTAC
GAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCATCCA
CAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTTTTT
CCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAGCAG
GAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGGTGG
GGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGACAC
GCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTCTGC
CTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACCAGA
TCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGTCTT
CCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTTAAA
AATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCACTGT
GAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACTGTC
TCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTTTGT
GGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCCTGC
TCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCTGTG
GGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAATTCTC
TCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006238699 ⟹ XP_006238761

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,706,555 - 134,730,887 (+)	NCBI
Rnor_5.0	5	138,476,301 - 138,514,361 (+)	NCBI

Sequence:

show sequence

TGTCTTTGTGTGGGAAGCCATAAAATATAATATTGAGTATGTGGCTCTGCCCAGGGTTATGCTG
CTTGCACGGGAGGCTCCACAGCCCTGCTGTGGTAAAGAGCACGTATAAACTGCCGCTAACAGGG
TTTTCTGTCTAGAGCTGTAAGTACGTCTGAGAGGCCCCTGTGAGTCGCAATGCTGCCAGCTCTC
CTGCTGTTCTCCACACTGCCTGCCTGTTGGCTGTTTGGTTTGTCCACAGGCTCCTAATTGGAGT
GTGGCCAGGGGAGGGTGAAGGAGCAGAAACCACATCTGTTCGCTCCACTCTGGGTTTGCAGCAC
TGGTGAGGAATAGTTGGGACAAGGGCTGACACTAGACTGCATGCCACGGGGAAGACAGTCCAGT
CATATCCCAACCCCGTCCTGTCCCCTCCCCCAGTCCTTCAAAGACAAATGGCCTTGCACTTTGT
TTCGGAAGAATTTCTCCCAGTGCCCCGTAATGCATCTGGAGGGCATTTCTCCTTGTGATTTACC
TCACGGGTGTGGGTACCTCAGTAGCAGGATTTAATCCTTTGAGAGTTGTAGGGCTGTGTCATCC
CCGGGTAGAACTTGAGCTTGAAGCTGTTGGTGGGAGCGATATTTTCAGATGCTCTGTGGATTCT
TTGTATCCGTGTATTTTTTTTTCTGCTCTGTTCTGGGGTGTAATTGAAAACCTGCTGTGATCAG
ATCACTACCATGGACGGAGGGATGCATCTAAGTGGGGCTGTCAGACGCTTGGCTGCTTAGCTGT
GCTTTCTGGATTGTGGTGTTGAAAGTGCCATTCTGCATGCTTCCTGCTAACAACCGCCAAGAGC
CTGCCTCTGTGGGCAGCATGCATGTGGGCAGTGGCACTAAGCAACCTTCTGCCGGACCCTTGGA
GAAGGGAGTGGGCCTTCTCCTCCGTGAGCGAAGAACCTGATTCCATTTTAAAATTTCTCAGGAC
AAACCAAGCCTCAGAGCCTATGTTTATTGAAGTTTGGGGTGGAAGGCTCTCACATCCTCCACCC
GTCAGAAGGATATAGAGGCTTAATCACCCTGGTGGGGATTTAGACCCAGAGACTTCAGAGAAAT
CTTATTATTTCTAACTGCAGGCAAAGAGTATTAAGGCTCCACTCTGGATCCAGGGCATGACATG
TTCTCTAAGTAATTTATCTTTACCAGGGGAAGGCCCCTACTAGAGTGGCCTAGAAACAAACCTG
AGATGGGCTCTCATTGTTCCCCCTCTTTTCTTCCCCATCTCAGCCTCCTGCTGCTTCCTTCTGT
CCTGACCCTTCCTGCCCACAATGTCCTGTGTCTGTGTCTGCCAGCATGGGCGTCGGGTGCCTGC
CAGGGAGAGATAATGATATCTTTACAGTCCGTGGCCTCATCCAGCCTCGTAAACTTGTCAGTGG
CTGGCCTCCCTGCACCCCTTCAGAGAAGGACCAGGGAAGGGAGAAGATGGAGTGAGGGGATTGG
GGCCTTCCACAGCCCCCAGTGCAGGTCATGGAAATATTGCTCAGCTTTCTGATTTCCAGAGATG
GGCAGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACCC
GGGCCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGGG
AGAAGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGTC
AAAATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTGT
ACCAGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGATT
TTACTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCAC
TTCAATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCATA
CTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGGT
GTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCACT
CCCATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGG
TGGAGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTGT
GGTCCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGGC
TGGGACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCA
AATACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAA
GCTCCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTG
CAAGGGCAAGCTCCAGAAAGGGGACTCCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCACCA
TGGACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTCAGCATGAAGA
GAATGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAAGCTGTCCCCT
CCATCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAAGCAAACTCTT
GTTCCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCCCCTGACAACC
TACGAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGGCCTTTACCAT
CCACAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAGGAAAAAGCTT
TTTCCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAATAGCCTGCAG
CAGGAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATCCAGCTTTTGG
TGGGGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGAAGCTGACAGA
CACGCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAGACGTCCTCTC
TGCCTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAGGGAACCAACC
AGATCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTGACCGAGATGT
CTTCCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATTATTCCTTTTT
AAAAATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTCAAACTCGCAC
TGTGAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCTCCTCCCCACT
GTCTCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTCCCAGGTCTTT
TGTGGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGCCCTGCTGCCC
TGCTCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGTCAGATAAGCT
GTGGGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGACCACCCAAATT
CTCTCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_017593578 ⟹ XP_017449067

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,706,555 - 134,730,887 (+)	NCBI

Sequence:

show sequence

TGTCTTTGTGTGGGAAGCCATAAAATATAATATTGAGTATGTGGCTCTGCCCAGGGTTATGCTG
CTTGCACGGGAGGCTCCACAGCCCTGCTGTGGTAAAGAGCACGTATAAACTGCCGCTAACAGGG
TTTTCTGTCTAGAGCTGTAAGTACGTCTGAGAGGCCCCTGTGAGTCGCAATGCTGCCAGCTCTC
CTGCTGTTCTCCACACTGCCTGCCTGTTGGCTGTTTGGTTTGTCCACAGGCTCCTAATTGGAGT
GTGGCCAGGGGAGGGTGAAGGAGCAGAAACCACATCTGTTCGCTCCACTCTGGGTTTGCAGCAC
TGGTGAGGAATAGTTGGGACAAGGGCTGACACTAGACTGCATGCCACGGGGAAGACAGTCCAGT
CATATCCCAACCCCGTCCTGTCCCCTCCCCCAGTCCTTCAAAGACAAATGGCCTTGCACTTTGT
TTCGGAAGAATTTCTCCCAGTGCCCCGTAATGCATCTGGAGGGCATTTCTCCTTGTGATTTACC
TCACGGGTGTGGGTACCTCAGTAGCAGGATTTAATCCTTTGAGAGTTGTAGGGCTGTGTCATCC
CCGGGTAGAACTTGAGCTTGAAGCTGTTGGTGGGAGCGATATTTTCAGATGCTCTGTGGATTCT
TTGTATCCGTGTATTTTTTTTTCTGCTCTGTTCTGGGGTGTAATTGAAAACCTGCTGTGATCAG
ATCACTACCATGGACGGAGGGATGCATCTAAGTGGGGCTGTCAGACGCTTGGCTGCTTAGCTGT
GCTTTCTGGATTGTGGTGTTGAAAGTGCCATTCTGCATGCTTCCTGCTAACAACCGCCAAGAGC
CTGCCTCTGTGGGCAGCATGCATGTGGGCAGTGGCACTAAGCAACCTTCTGCCGGACCCTTGGA
GAAGGGAGTGGGCCTTCTCCTCCGTGAGCGAAGAACCTGATTCCATTTTAAAATTTCTCAGGAC
AAACCAAGCCTCAGAGCCTATGTTTATTGAAGTTTGGGGTGGAAGGCTCTCACATCCTCCACCC
GTCAGAAGGATATAGAGGCTTAATCACCCTGGTGGGGATTTAGACCCAGAGACTTCAGAGAAAT
CTTATTATTTCTAACTGCAGGCAAAGAGTATTAAGGCTCCACTCTGGATCCAGGGCATGACATG
TTCTCTAAGTAATTTATCTTTACCAGGGGAAGGCCCCTACTAGAGTGGCCTAGAAACAAACCTG
AGATGGGCTCTCATTGTTCCCCCTCTTTTCTTCCCCATCTCAGCCTCCTGCTGCTTCCTTCTGT
CCTGACCCTTCCTGCCCACAATGTCCTGTGTCTGTGTCTGCCAGCATGGGCGTCGGGTGCCTGC
CAGGGAGAGATAATGATATCTTTACAGTCCGTGGCCTCATCCAGCCTCGTAAACTTGTCAGTGG
CTGGCCTCCCTGCACCCCTTCAGAGAAGGACCAGGGAAGGGAGAAGATGGAGTGAGGGGATTGG
GGCCTTCCACAGCCCCCAGTGCAGGTCATGGAAATATTGCTCAGCTTTCTGATTTCCAGGTTCT
ATTCCTGCTCCCTCCTTACCCAGTTCGCAGCCCCAGGGACCGTCTTTCTGATGATCACAGAGAT
GGGCAGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACC
CGGGCCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGG
GAGAAGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGT
CAAAATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTG
TACCAGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGAT
TTTACTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCA
CTTCAATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCAT
ACTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGG
TGTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCAC
TCCCATAACCACACCAGAGCTGACCACTCCAGTCACTGTGGGGCTGACTGCGGCTGGGACCGGG
GAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGCAAATACGAGTT
TCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTAAGCTCCTGGTT
CGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGTGCAAGGGAAAC
AGCAGCACCATGGACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCGCCAGCTGTCTC
AGCATGAAGAGAATGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTCTGCTCCATGAA
GCTGTCCCCTCCATCCAAATCTCGCCTGGCACGAAGGCGAGCCCTGGCCCACGCTGGCCGAGAA
GCAAACTCTTGTTCCACACCCGCAGGGCTCTGAACTGATATGCAGGCACACCTTGTCGGTGCCC
CCTGACAACCTACGAGGTCAAAGTGTGAAGCTAGCCGAGGGACCTGCCCTGCAGCCCCAGCAGG
CCTTTACCATCCACAAAGGCTCCTGGGTTCCCACCCATCCCCCATTTCCCTTGGGTCCTCAAAG
GAAAAAGCTTTTTCCAAAGGGGTTGTCTTTGAAAAGGAAGGCAATCACTTGTCACTTTGCATAA
TAGCCTGCAGCAGGAACATCTCTCTGCCCGGCTCCAACTGCTCCCAGTGTGCAGATCCCGGATC
CAGCTTTTGGTGGGGGCTGCTGGGGCTGCAGCCTTCAGGGAGCCGGCTTCCAGGAGCTGACAGA
AGCTGACAGACACGCCTCTTCTCCCCTGCACTGTCACCTTCTCCCACCTTCCTCTGTCCTACAG
ACGTCCTCTCTGCCTGTCTTCTCCCCGGCTGAGCAAAGCCATCCCCTCAATTCAGGAAGGGCAG
GGAACCAACCAGATCAGTCTTCCAGTCTGTAGCACGGAGAAGCACATAATCTTTCTTTGCCTTG
ACCGAGATGTCTTCCTCATTTATCATCCTCTTCCGTGTTTCGGATTGTTGCTAAAGTCAGTATT
ATTCCTTTTTAAAAATGCGTTTGCTTTATTTTTAACCATGTTCTTCCAGCAACCATAGAACTTC
AAACTCGCACTGTGAGCCCATGGACTTCCCCAGGCAGATGCCCATGCACTTGGGTTTTAATCCT
CCTCCCCACTGTCTCCAACTTTAAAGACCGGTGCCTTCGCATCTTTGTCTGCCACTGCCTTCTC
CCAGGTCTTTTGTGGAGAGAGGCACAAACCCAGGGCAGTCAGACTGCTGTGTCCGAGATGAAGC
CCTGCTGCCCTGCTCTGAGAAATGCTGTGCCCACTGCCCCCAGACATGAAGGCACAGCCACTGT
CAGATAAGCTGTGGGGTCACATAAAACAGATTTGCACATGTGACATACGTTAGTCAACCACGAC
CACCCAAATTCTCTCATAACTTGTGCTTATTTTAATAAATAATTTAAAATTTTA

hide sequence

RefSeq Acc Id:

XM_017593579 ⟹ XP_017449068

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,706,555 - 134,729,753 (+)	NCBI

Sequence:

show sequence

TGTCTTTGTGTGGGAAGCCATAAAATATAATATTGAGTATGTGGCTCTGCCCAGGGTTATGCTG
CTTGCACGGGAGGCTCCACAGCCCTGCTGTGGTAAAGAGCACGTATAAACTGCCGCTAACAGGG
TTTTCTGTCTAGAGCTGTAAGTACGTCTGAGAGGCCCCTGTGAGTCGCAATGCTGCCAGCTCTC
CTGCTGTTCTCCACACTGCCTGCCTGTTGGCTGTTTGGTTTGTCCACAGGCTCCTAATTGGAGT
GTGGCCAGGGGAGGGTGAAGGAGCAGAAACCACATCTGTTCGCTCCACTCTGGGTTTGCAGCAC
TGGTGAGGAATAGTTGGGACAAGGGCTGACACTAGACTGCATGCCACGGGGAAGACAGTCCAGT
CATATCCCAACCCCGTCCTGTCCCCTCCCCCAGTCCTTCAAAGACAAATGGCCTTGCACTTTGT
TTCGGAAGAATTTCTCCCAGTGCCCCGTAATGCATCTGGAGGGCATTTCTCCTTGTGATTTACC
TCACGGGTGTGGGTACCTCAGTAGCAGGATTTAATCCTTTGAGAGTTGTAGGGCTGTGTCATCC
CCGGGTAGAACTTGAGCTTGAAGCTGTTGGTGGGAGCGATATTTTCAGATGCTCTGTGGATTCT
TTGTATCCGTGTATTTTTTTTTCTGCTCTGTTCTGGGGTGTAATTGAAAACCTGCTGTGATCAG
ATCACTACCATGGACGGAGGGATGCATCTAAGTGGGGCTGTCAGACGCTTGGCTGCTTAGCTGT
GCTTTCTGGATTGTGGTGTTGAAAGTGCCATTCTGCATGCTTCCTGCTAACAACCGCCAAGAGC
CTGCCTCTGTGGGCAGCATGCATGTGGGCAGTGGCACTAAGCAACCTTCTGCCGGACCCTTGGA
GAAGGGAGTGGGCCTTCTCCTCCGTGAGCGAAGAACCTGATTCCATTTTAAAATTTCTCAGGAC
AAACCAAGCCTCAGAGCCTATGTTTATTGAAGTTTGGGGTGGAAGGCTCTCACATCCTCCACCC
GTCAGAAGGATATAGAGGCTTAATCACCCTGGTGGGGATTTAGACCCAGAGACTTCAGAGAAAT
CTTATTATTTCTAACTGCAGGCAAAGAGTATTAAGGCTCCACTCTGGATCCAGGGCATGACATG
TTCTCTAAGTAATTTATCTTTACCAGGGGAAGGCCCCTACTAGAGTGGCCTAGAAACAAACCTG
AGATGGGCTCTCATTGTTCCCCCTCTTTTCTTCCCCATCTCAGCCTCCTGCTGCTTCCTTCTGT
CCTGACCCTTCCTGCCCACAATGTCCTGTGTCTGTGTCTGCCAGCATGGGCGTCGGGTGCCTGC
CAGGGAGAGATAATGATATCTTTACAGTCCGTGGCCTCATCCAGCCTCGTAAACTTGTCAGTGG
CTGGCCTCCCTGCACCCCTTCAGAGAAGGACCAGGGAAGGGAGAAGATGGAGTGAGGGGATTGG
GGCCTTCCACAGCCCCCAGTGCAGGTCATGGAAATATTGCTCAGCTTTCTGATTTCCAGGTTCT
ATTCCTGCTCCCTCCTTACCCAGTTCGCAGCCCCAGGGACCGTCTTTCTGATGATCACAGAGAT
GGGCAGCAGTGAGCCCCTTCCCATCGTGGATAGTGACAAGAGGAGAAAGAAGAAGCGTAAGACC
CGGGCCACCGACTCTCTGCCAGGGAAGTTTGAAGACGTGTACCAGCTGACCTCAGAATTGCTGG
GAGAAGGAGCCTATGCCAAAGTCCAGGGTGCCGTGAGCCTGCAGAGTGGCAAAGAGTATGCAGT
CAAAATCATCGAGAAGCAAGCAGGACACAGTCGAAGCCGAGTATTCCGTGAGGTGGAGACGTTG
TACCAGTGTCAAGGAAACAGGAACATTTTGGAGCTGATTGAATTCTTTGAAGATGACACACGAT
TTTACTTGGTCTTTGAGAAATTGCAAGGAGGCTCCATCCTAGCACACATCCAGAAGCGGAAGCA
CTTCAATGAGCTAGAAGCCAGCAGAGTGGTGCGGGATGTCGCCACTGCCCTTGATTTCCTGCAT
ACTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATATTGTGCGAATCTCCAGAAAAGG
TGTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGAGTAAAATTGAACAACTCCTGCAC
TCCCATAACCACACCAGAGCTGACCACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTG
GTGGAGGTCTTTAGGGACGAGGCTACTTTCTATGACAAGCGCTGTGACCTGTGGAGCCTGGGTG
TGGTCCTCTACATCATGCTGAGTGGCTACCCCCCCTTTGTAGGTCACTGTGGGGCTGACTGCGG
CTGGGACCGGGGAGAGGTATGCAGGATGTGCCAGAACAAGCTGTTCGAAAGCATCCAGGAAGGC
AAATACGAGTTTCCCGACAAAGACTGGGCTCACATCTCCACCGAGGCCAAAGACCTCATCTCTA
AGCTCCTGGTTCGAGATGCGAAGCAGAGACTCAGCGCTGCCCAAGTTCTGCAGCATCCATGGGT
GCAAGGGAAACAGCAGCACCATGGACTTGACACTCTTCGCAGCTGAGGCCATTGCCCTCAACCG
CCAGCTGTCTCAGCATGAAGAGAATGAACTGGCTGAGGAACACGAGGCCCTAGCCGAGGGCCTC
TGCTCCATGAAGCTGTCCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001037732	(Get FASTA)	NCBI Sequence Viewer
	XP_006238756	(Get FASTA)	NCBI Sequence Viewer
	XP_006238757	(Get FASTA)	NCBI Sequence Viewer
	XP_006238758	(Get FASTA)	NCBI Sequence Viewer
	XP_006238759	(Get FASTA)	NCBI Sequence Viewer
	XP_006238760	(Get FASTA)	NCBI Sequence Viewer
	XP_006238761	(Get FASTA)	NCBI Sequence Viewer
	XP_017449067	(Get FASTA)	NCBI Sequence Viewer
	XP_017449068	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98754	(Get FASTA)	NCBI Sequence Viewer
	EDL90300	(Get FASTA)	NCBI Sequence Viewer
	EDL90301	(Get FASTA)	NCBI Sequence Viewer
	EDL90302	(Get FASTA)	NCBI Sequence Viewer
	Q4G050	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001037732 ⟸ NM_001044267

- UniProtKB:

Q4G050 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYA
VKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKRK
HFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC
TPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC
GWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQVLQHPW
VQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLS
PPSKSRLARRRALAHAGREANSCSTPAGL

hide sequence

RefSeq Acc Id:	XP_006238759 ⟸ XM_006238697
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K3K7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQNRPEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQ SGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILA HIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGV KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVG HCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQ VLQHPWVQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGL CSMKLSPPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

RefSeq Acc Id:	XP_006238758 ⟸ XM_006238696
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K3K7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQNRPEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQ SGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILA HIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGV KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVG HCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQ VLQHPWVQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGL CSMKLSPPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

RefSeq Acc Id:	XP_006238760 ⟸ XM_006238698
- Peptide Label:	isoform X4
- UniProtKB:	Q4G050 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYA VKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKRK HFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC TPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC GWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQVLQHPW VQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLS PPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

RefSeq Acc Id:

XP_006238757 ⟸ XM_006238695

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEILLSFLISRFYSCSLLTQFAAPGTVFLMITEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGK
FEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNI
LELIEFFEDDTRFYLVFEKLQGGSILAHIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDL
KPENILCESPEKVSPVKICDFDLGSGVKLNNSCTPITTPELTTPVTVGLTAAGTGERYAGCART
SCSKASRKANTSFPTKTGLTSPPRPKTSSLSSWFEMRSRDSALPKFCSIHGCKGKLQKGDSPRR
KSFRGKRFCPTHCLPTLALTFPQISALCGEWAHLQTMRPSPESSLCPSILSLISIDSSLSASSQ
PFFAEKPVFYSLERDCESPFTNRRWSLSMAHLHRRVLLLAKGERRGSRPLQGRGTSCHIHC

hide sequence

RefSeq Acc Id:

XP_006238756 ⟸ XM_006238694

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEILLSFLISRFYSCSLLTQFAAPGTVFLMITEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGK
FEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNI
LELIEFFEDDTRFYLVFEKLQGGSILAHIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDL
KPENILCESPEKVSPVKICDFDLGSGVKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEAT
FYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDW
AHISTEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPERGLPTPQVLQRNSSTMDLTLFAAE
AIALNRQLSQHEENELAEEHEALAEGLCSMKLSPPSKSRLARRRALAHAGREANSCSTPAGL

hide sequence

RefSeq Acc Id:	XP_006238761 ⟸ XM_006238699
- Peptide Label:	isoform X4
- UniProtKB:	Q4G050 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGSSEPLPIVDSDKRRKKKRKTRATDSLPGKFEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYA VKIIEKQAGHSRSRVFREVETLYQCQGNRNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKRK HFNELEASRVVRDVATALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC TPITTPELTTPCGSAEYMAPEVVEVFRDEATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC GWDRGEVCRMCQNKLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQVLQHPW VQGQAPERGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLS PPSKSRLARRRALAHAGREANSCSTPAGL hide sequence

RefSeq Acc Id:

XP_017449067 ⟸ XM_017593578

- Peptide Label:

isoform X5

- Sequence:

show sequence

MEILLSFLISRFYSCSLLTQFAAPGTVFLMITEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGK
FEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNI
LELIEFFEDDTRFYLVFEKLQGGSILAHIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDL
KPENILCESPEKVSPVKICDFDLGSGVKLNNSCTPITTPELTTPVTVGLTAAGTGERYAGCART
SCSKASRKANTSFPTKTGLTSPPRPKTSSLSSWFEMRSRDSALPKFCSIHGCKGNSSTMDLTLF
AAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLSPPSKSRLARRRALAHAGREANSCSTPAG
L

hide sequence

RefSeq Acc Id:

XP_017449068 ⟸ XM_017593579

- Peptide Label:

isoform X6

- Sequence:

show sequence

MEILLSFLISRFYSCSLLTQFAAPGTVFLMITEMGSSEPLPIVDSDKRRKKKRKTRATDSLPGK
FEDVYQLTSELLGEGAYAKVQGAVSLQSGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNRNI
LELIEFFEDDTRFYLVFEKLQGGSILAHIQKRKHFNELEASRVVRDVATALDFLHTKGIAHRDL
KPENILCESPEKVSPVKICDFDLGSGVKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFRDEAT
FYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRMCQNKLFESIQEGKYEFPDKDW
AHISTEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGKQQHHGLDTLRS

hide sequence

RefSeq Acc Id:

ENSRNOP00000061535 ⟸ ENSRNOT00000067655

RefSeq Acc Id:

ENSRNOP00000072679 ⟸ ENSRNOT00000091543

Protein Domains

Protein kinase

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693932

Promoter ID:

EPDNEW_R4449

Type:

multiple initiation site

Name:

Mknk1_1

Description:

MAP kinase-interacting serine/threonine kinase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	134,691,897 - 134,691,957	EPDNEW

Strain Variation

Strain Sequence Variants (Rnor 6.0)

ACI/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

ACI/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

ACI/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

BBDP/Wor (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

BN/SsN (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Buf/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

COP/CrCrl (MCW & UW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob) University of Wisconsin (Dr. James Shull)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Charles River Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)

F344/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

F344/NRrrc (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

FHH/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHH/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

FHL/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHL/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

GH/OmrMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

GK/Ox (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LE/Stm (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/Crl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/NCrlBR (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LH/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LL/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LN/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

M520/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

MHS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MNS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MR/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

SBH/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBH/Ygl sequenced by MCW

SBH/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SBN/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBN/Ygl sequenced by MCW

SBN/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHR/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHRSP/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SR/JrHsd (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Harlan Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SR/JrHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/Jr (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/JrHsdMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SS/JrHsdMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WAG/Rij (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

WKY/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WN/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Damaging Variants

Assembly: Rnor_5.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain
5	138513278	138513279	C	G	snv	COP/CrCrl (MCW & UW)

Assembly: Rnor_6.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain
5	134729804	134729805	C	G	snv	COP/CrCrl (MCW & UW)

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559603	AgrOrtholog
Ensembl Genes	ENSRNOG00000010381	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000061535	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOP00000072679	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067655	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000091543	ENTREZGENE, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7370127	IMAGE-MGC_LOAD
InterPro	Kinase-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:500526	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:112775	IMAGE-MGC_LOAD
NCBI Gene	500526	ENTREZGENE
Pfam	Pkinase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Mknk1	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	S_TKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene	Rn.230218	ENTREZGENE
UniProt	A0A0G2K3K7	ENTREZGENE, UniProtKB/TrEMBL
	MKNK1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-08-08	Mknk1	MAPK interacting serine/threonine kinase 1	Mknk1	MAP kinase-interacting serine/threonine kinase 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-06	Mknk1	MAP kinase-interacting serine/threonine kinase 1	MGC112775	similar to map kinase interacting kinase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	MGC112775	similar to map kinase interacting kinase			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)