Gene: Arid1a (AT-rich interaction domain 1A) Rattus norvegicus
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Symbol: Arid1a
Name: AT-rich interaction domain 1A
Description: ENCODES a protein that exhibits DNA binding (ortholog); ligand-dependent nuclear receptor binding (ortholog); nucleosome binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); ATP-dependent chromatin remodeling (ortholog); cardiac chamber development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Adenocarcinoma (ortholog); Adenocarcinoma of Esophagus (ortholog); Burkitt Lymphoma (ortholog); FOUND IN nBAF complex (ortholog); npBAF complex (ortholog); nuclear chromatin (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AT rich interactive domain 1A (SWI-like); AT rich interactive domain 1A (Swi1 like); AT-rich interactive domain-containing protein 1A; LOC297867
Orthologs:
Homo sapiens (human) : ARID1A (AT-rich interaction domain 1A)  HGNC  AGR
Mus musculus (house mouse) : Arid1a (AT rich interactive domain 1A (SWI-like))  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Arid1a (AT-rich interaction domain 1A)
Canis lupus familiaris (dog) : ARID1A (AT-rich interaction domain 1A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid1a (AT-rich interaction domain 1A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05151,904,687 - 151,977,973 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05155,592,617 - 155,665,889 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45151,355,617 - 151,398,647 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15151,335,330 - 151,408,688 (+)NCBI
Celera5144,329,185 - 144,372,216 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Arid1a
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310500
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2017-10-24
Status: ACTIVE