Gene: Pogz (pogo transposable element derived with ZNF domain) Rattus norvegicus
Analyze
Symbol: Pogz
Name: pogo transposable element derived with ZNF domain
Description: ENCODES a protein that exhibits DNA binding (inferred); INVOLVED IN kinetochore assembly (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cutaneous Malignant Melanoma, Susceptibility To, 1 (ortholog); Deafness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear chromatin (ortholog); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; chloroprene
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC102546890; LOC310658; pogo transposable element with ZNF domain; pogo transposable element with ZNF domain-like
Orthologs:
Homo sapiens (human) : POGZ (pogo transposable element derived with ZNF domain)  HGNC  Alliance
Mus musculus (house mouse) : Pogz (pogo transposable element with ZNF domain)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pogz (pogo transposable element derived with ZNF domain)
Pan paniscus (bonobo/pygmy chimpanzee) : POGZ (pogo transposable element derived with ZNF domain)
Canis lupus familiaris (dog) : POGZ (pogo transposable element derived with ZNF domain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pogz (pogo transposable element derived with ZNF domain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02195,995,322 - 196,041,500 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02215,507,126 - 215,534,827 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42189,748,657 - 189,776,355 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12189,685,298 - 189,728,992 (+)NCBI
Celera2174,957,108 - 174,984,012 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pogz
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309980
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE