Gene: Irx2 (iroquois homeobox 2) Rattus norvegicus
Analyze
Symbol: Irx2
Name: iroquois homeobox 2
Description: ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN metanephros development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); proximal/distal pattern formation involved in metanephric nephron development (ortholog); ASSOCIATED WITH lung disease (ortholog); FOUND IN nucleus (inferred); INTERACTS WITH 6-propyl-2-thiouracil; benzo[a]pyrene; bisphenol A
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Iroquois related homeobox 2; Iroquois related homeobox 2 (Drosophila); Iroquois related homeobox 5; Iroquois related homeobox 5 (Drosophila); iroquois-class homeodomain protein IRX-2; Irx5; LOC306657
Orthologs:
Homo sapiens (human) : IRX2 (iroquois homeobox 2)  HGNC  Alliance
Mus musculus (house mouse) : Irx2 (Iroquois homeobox 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Irx2 (iroquois homeobox 2)
Pan paniscus (bonobo/pygmy chimpanzee) : IRX2 (iroquois homeobox 2)
Canis lupus familiaris (dog) : IRX2 (iroquois homeobox 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Irx2 (iroquois homeobox 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0133,270,388 - 33,275,868 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0134,682,802 - 34,688,217 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.417743,534 - 748,950 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.117743,533 - 748,952 (-)NCBI
Celera129,295,635 - 29,301,053 (-)NCBICelera
Cytogenetic Map1p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Irx2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309834
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE