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| Gene: Blm (Bloom syndrome RecQ like helicase) Rattus norvegicus |  Analyze |
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Analyze GeneStrainQTL List
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| Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:23028338 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:16501249 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:23292937 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:23028338 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:24733792 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:23129629 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:10965492 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:10069810 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:28360267 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:24728327 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:10069810 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:10090915 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:23129629 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:23129629 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:25637381 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:17407155 PMID:25525159 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:26358404 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:15609317 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:24033266 PMID:25741868 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:27356891 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:26247052 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:17407155 PMID:26247052 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:18471088 PMID:25525159 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:24728327 PMID:25741868 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:25741868 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:17407155 PMID:7585968 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:9285778 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:18414213 PMID:26296701 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:17407155 PMID:20301572 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:18471088 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | PMID:17407155 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:24728327 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:17407155 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by OMIM:210900 | ClinVar | | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:28492532 PMID:9388480 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:24728327 more ... | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:25741868 PMID:28492532 | Bloom Syndrome | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Bloom syndrome | ClinVar | PMID:28492532 | breast cancer, familial | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Familial cancer of breast | ClinVar | PMID:18414213 PMID:26296701 | cutaneous malignant melanoma, susceptibility to, 1 | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Malignant melanoma | ClinVar | PMID:28492532 | Melanoma | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Malignant melanoma | ClinVar | PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by null | ClinVar | | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:23028338 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:17407155 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:16501249 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:23292937 PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:23028338 PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:24733792 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:23129629 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:10965492 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:10069810 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:28360267 PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:17407155 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:24728327 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:17407155 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:23129629 PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:23129629 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:25637381 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:17407155 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:15609317 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:24033266 PMID:25741868 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:24728327 PMID:25741868 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:25741868 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:23129629 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:24728327 PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:17407155 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:17407155 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Neoplastic Syndromes, Hereditary | ClinVar | PMID:24728327 more ... | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:25741868 PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by term: Hereditary cancer-predisposing syndrome | ClinVar | PMID:28492532 | Neoplastic Syndromes, Hereditary | | ISO | RGD:1318795 | 8554872 | ClinVar Annotator: match by null | ClinVar | PMID:24728327 | |
Imported Annotations - CTD
Imported Annotations - OMIM
Gene-Chemical Interaction AnnotationsGene Ontology AnnotationsBiological Process
Cellular Component
Molecular Function
Molecular Pathway AnnotationsRGD Manual Annotations
Disease Annotations
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Gene-Chemical Interaction AnnotationsGene Ontology AnnotationsBiological Process
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Cellular Component
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Molecular Function
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Molecular Pathway AnnotationsReferences - curated| 1. | Brosh RM Jr, etal., J Biol Chem. 2000 Aug 4;275(31):23500-8. |
| 2. | GOA data from the GO Consortium |
| 3. | Heyer WD, etal., Annu Rev Genet. 2010;44:113-39. doi: 10.1146/annurev-genet-051710-150955. |
| 4. | Kaneko H, etal., Biochem Biophys Res Commun. 1997 Nov 17;240(2):348-53. |
| 5. | MGD data from the GO Consortium |
| 6. | OMIM Disease Annotation Pipeline |
| 7. | RGD automated data pipeline |
| 8. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 9. | RGD automated import pipeline for gene-chemical interactions |
| 10. | RGD comprehensive gene curation |
| 11. | Yankiwski V, etal., Proc Natl Acad Sci U S A. 2000 May 9;97(10):5214-9. |
References - uncurated| PubMed | 9388193 9671747 9808625 9840919 10359700 10728666 10871376 11046052 11101838 11309417 11433031 11500040 11735402 11781842 12181313 12818200 15364958 15367665 15450411 15604258 16914751 17115688 17210642 17696610 17878217 17982445 19734539 20639533 21325134 23509288 24816114 25520194 25597246 25901030 26195664 27010503 28228481 |
RGD Disease Portals| Blm has been annotated in the following RGD Disease Portals. |
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Genomics
Candidate Gene StatusComparative Map Data| Blm (Rattus norvegicus - Norway rat) |
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| BLM (Homo sapiens - human) |
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| Blm (Mus musculus - house mouse) |
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| Blm (Chinchilla lanigera - long-tailed chinchilla) |
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| BLM (Pan paniscus - bonobo/pygmy chimpanzee) |
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| BLM (Canis lupus familiaris - dog) |
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| Blm (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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QTLs in Region (Rnor_6.0)| The following QTLs overlap with this region. |  | Full Report | | CSV | | TAB | | Printer | | Gviewer |
miRNA Target Status
Predicted Target Of
| The detailed report is available here: | | Full Report | | CSV | | TAB | | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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Sequence
Nucleotide Sequences| RefSeq Transcripts | XM_003748888 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| XM_003753301 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006223359 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006229458 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017589083 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017589087 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017590165 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017590166 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AABR07004423 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| AABR07004424 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AABR07071926 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01006533 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01006534 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01006535 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01006536 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| CH473980 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Reference Sequences
| RefSeq Acc Id: | NM_001107526 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
ACCTCGGCCATTTCCCCAGTCATCTGCCTCAGTTCCTCCAATCCTTGCTTGTGGAGAGAAGCCChide sequence |
| RefSeq Acc Id: | XM_003748888 | ||||||||||||||
| RefSeq Status: | |||||||||||||||
| Type: | CODING | ||||||||||||||
| Position: |
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| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_003753301 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_006223360 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGCGCGGAhide sequence |
| RefSeq Acc Id: | XM_006223359 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_006223361 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
CAGCAGCGATAAATAGAGCAGTTTGTGTCCTTGAGGGTCTTACTGTCTGCTCTGCTGGCTTAGChide sequence |
| RefSeq Acc Id: | XM_006229459 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
ATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGCGCGGAhide sequence |
| RefSeq Acc Id: | XM_006229458 | ||||||||||||||
| RefSeq Status: | |||||||||||||||
| Type: | CODING | ||||||||||||||
| Position: |
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| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_006229460 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
CAGCAGCGATAAATAGAGCAGTTTGTGTCCTTGAGGGTCTTACTGTCTGCTCTGCTGGCTTAGChide sequence |
| RefSeq Acc Id: | XM_008774594 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
AATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCChide sequence |
| RefSeq Acc Id: | XM_008774596 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_008774595 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_008774597 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATCTCACCTTCATTTCAGTGCTTTCTAATTAAAGCTGAGCCCTGGGAGCAGCAGCGATAAATAGhide sequence |
| RefSeq Acc Id: | XM_008759588 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
AATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCChide sequence |
| RefSeq Acc Id: | XM_008759590 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_008759589 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATCAGAATAATCCTTCTTGCGGCGCGAAGCGTACGGCGCGGGGCGCAGGAGGGCCGAGTCCCCGhide sequence |
| RefSeq Acc Id: | XM_008759591 |
| RefSeq Status: | |
| Type: | CODING |
| Position: | No map positions available. |
| Sequence: |
ATCTCACCTTCATTTCAGTGCTTTCTAATTAAAGCTGAGCCCTGGGAGCAGCAGCGATAAATAGhide sequence |
| RefSeq Acc Id: | XM_017589083 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| RefSeq Acc Id: | XM_017589087 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| RefSeq Acc Id: | XM_017590165 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| RefSeq Acc Id: | XM_017590166 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | XP_003748936 | (Get FASTA) | NCBI Sequence Viewer |
| XP_003753349 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006223421 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006229520 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017444572 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017444576 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017445654 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017445655 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | EDM08651 | (Get FASTA) | NCBI Sequence Viewer |
| EDM08652 | (Get FASTA) | NCBI Sequence Viewer |
Reference Sequences
| Protein Acc Id: | XP_003748936 |
| Peptide Label: | isoform X2 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSISKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_003753349 |
| Peptide Label: | isoform X2 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSVSKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_006223422 |
| Sequence: |
MAAVPLNNLQEQLQRHSARKLKNQFSVSKPKPSGFTFKKKTPEGDVSVVRTPVLSDKDVNMSEAhide sequence |
| Protein Acc Id: | XP_006223421 |
| Peptide Label: | isoform X1 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSVSKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_006223423 |
| Sequence: |
MHEEVDSAKKSHEDEAAFQSPQNALYFEHNDNDYDIDFVPPSPEEIISTASSSLKCSSMLKDLDhide sequence |
| Protein Acc Id: | XP_006229521 |
| Sequence: |
MAAVPLNNLQEQLQRHSARKLKNQFSISKPKPSGFTFKKKTPEGDVSVVRTPVLSDKDVNMSEAhide sequence |
| Protein Acc Id: | XP_006229520 |
| Peptide Label: | isoform X1 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSISKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_006229522 |
| Sequence: |
MHEEVDSAKKSHEDKAAFQSPQNALYFEHNDNDYDIDFVPPSPEEIISTASSSLKCSSMLKDLDhide sequence |
| Protein Acc Id: | XP_008772816 |
| Peptide Label: | isoform X1 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSVSKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_008772818 |
| Peptide Label: | isoform X3 |
| Sequence: |
MAAVPLNNLQEQLQRHSARKLKNQFSVSKPKPSGFTFKKKTPEGDVSVVRTPVLSDKDVNMSEAhide sequence |
| Protein Acc Id: | XP_008772817 |
| Peptide Label: | isoform X2 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSVSKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_008772819 |
| Peptide Label: | isoform X6 |
| Sequence: |
MHEEVDSAKKSHEDEAAFQSPQNALYFEHNDNDYDIDFVPPSPEEIISTASSSLKCSSMLKDLDhide sequence |
| Protein Acc Id: | XP_008757810 |
| Peptide Label: | isoform X1 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSISKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_008757812 |
| Peptide Label: | isoform X3 |
| Sequence: |
MAAVPLNNLQEQLQRHSARKLKNQFSISKPKPSGFTFKKKTPEGDVSVVRTPVLSDKDVNMSEAhide sequence |
| Protein Acc Id: | XP_008757811 |
| Peptide Label: | isoform X2 |
| Sequence: |
MFGSPVGWIMAAVPLNNLQEQLQRHSARKLKNQFSISKPKPSGFTFKKKTPEGDVSVVRTPVLShide sequence |
| Protein Acc Id: | XP_008757813 |
| Peptide Label: | isoform X6 |
| Sequence: |
MHEEVDSAKKSHEDKAAFQSPQNALYFEHNDNDYDIDFVPPSPEEIISTASSSLKCSSMLKDLDhide sequence |
| Protein Acc Id: | XP_017444572 |
| Peptide Label: | isoform X3 |
| Protein Acc Id: | XP_017444576 |
| Peptide Label: | isoform X4 |
| Protein Acc Id: | XP_017445654 |
| Peptide Label: | isoform X3 |
| Protein Acc Id: | XP_017445655 |
| Peptide Label: | isoform X4 |
TranscriptomeStrain Variation
Strain Sequence Variants
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Additional Information
External Database Links| Database | Acc Id | Source(s) |
| Ensembl Genes | ENSRNOG00000011213 | ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Protein | ENSRNOP00000015065 | ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Transcript | ENSRNOT00000015065 | ENTREZGENE, UniProtKB/TrEMBL |
| Gene3D-CATH | 1.10.10.10 | UniProtKB/TrEMBL |
| InterPro | BDHCT | UniProtKB/TrEMBL |
| BDHCT_assoc | UniProtKB/TrEMBL | |
| BLM_N | UniProtKB/TrEMBL | |
| DEAD-like_N | UniProtKB/TrEMBL | |
| DNA/RNA_helicase_C | UniProtKB/TrEMBL | |
| DNA/RNA_helicase_DEAD/DEAH_N | UniProtKB/TrEMBL | |
| DNA/RNA_helicase_DEAH_CS | UniProtKB/TrEMBL | |
| DNA_helicase_ATP-dep_RecQ | UniProtKB/TrEMBL | |
| HRDC-like | UniProtKB/TrEMBL | |
| HRDC_dom | UniProtKB/TrEMBL | |
| P-loop_NTPase | UniProtKB/TrEMBL | |
| RecQ_Zn-bd | UniProtKB/TrEMBL | |
| RQC_domain | UniProtKB/TrEMBL | |
| WH-like_DNA-bd_sf | UniProtKB/TrEMBL | |
| WH_DNA-bd_sf | UniProtKB/TrEMBL | |
| NCBI Gene | 308755 | ENTREZGENE |
| Pfam | BDHCT | UniProtKB/TrEMBL |
| BDHCT_assoc | UniProtKB/TrEMBL | |
| BLM_N | UniProtKB/TrEMBL | |
| DEAD | UniProtKB/TrEMBL | |
| Helicase_C | UniProtKB/TrEMBL | |
| HRDC | UniProtKB/TrEMBL | |
| RecQ_Zn_bind | UniProtKB/TrEMBL | |
| RQC | UniProtKB/TrEMBL | |
| PhenoGen | Blm | PhenoGen |
| PROSITE | DEAH_ATP_HELICASE | UniProtKB/TrEMBL |
| HELICASE_ATP_BIND_1 | UniProtKB/TrEMBL | |
| HELICASE_CTER | UniProtKB/TrEMBL | |
| HRDC | UniProtKB/TrEMBL | |
| SMART | DEXDc | UniProtKB/TrEMBL |
| HELICc | UniProtKB/TrEMBL | |
| HRDC | UniProtKB/TrEMBL | |
| RQC | UniProtKB/TrEMBL | |
| Superfamily-SCOP | HRDC_like | UniProtKB/TrEMBL |
| SSF46785 | UniProtKB/TrEMBL | |
| SSF52540 | UniProtKB/TrEMBL | |
| TIGRFAMs | recQ_fam | UniProtKB/TrEMBL |
| UniProt | D3ZQW1_RAT | UniProtKB/TrEMBL |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2016-02-11 | Blm | Bloom syndrome RecQ like helicase | Blm | Bloom syndrome, RecQ helicase-like | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2011-01-06 | Blm | Bloom syndrome, RecQ helicase-like | Blm | Bloom syndrome homolog (human) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2008-04-30 | Blm | Bloom syndrome homolog (human) | Blm_predicted | Bloom syndrome homolog (human) (predicted) | 'predicted' is removed | 2292626 | APPROVED |
| 2006-03-30 | Blm_predicted | Bloom syndrome homolog (human) (predicted) | Bloom syndrome (predicted) | Name updated | 1299863 | APPROVED | |
| 2005-01-12 | Blm_predicted | Bloom syndrome (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |
| More on Blm | |
|
Alliance Gene |
|
NCBI Gene |
|
Ensembl Gene |
|
|
JBrowse: rn5 rn6 |
|
NCBI Genome Data Viewer |
| RGD Object Information | |
| RGD ID: | 1308810 |
| Created: | 2005-01-12 |
| Species: | Rattus norvegicus |
| Last Modified: | 2018-04-10 |
| Status: | ACTIVE |
